Molecular recognition in proteins. Simulation analysis of substrate binding by a tyrosyl-tRNA synthetase mutant (Q50150501)

26 February 2018

title

Molecular recognition in proteins. Simulation analysis of substrate binding by a tyrosyl-tRNA synthetase mutant (English)

1 reference

26 February 2018

2

Karplus M

1 reference

26 February 2018

author name string

Lau FT

series ordinal

1

1 reference

26 February 2018

language of work or name

English

0 references

publication date

1 March 1994

1 reference

26 February 2018

Journal of Molecular Biology

published in

1 reference

26 February 2018

volume

236

1 reference

26 February 2018

issue

4

1 reference

26 February 2018

page(s)

1049-1066

1 reference

26 February 2018

Thermodynamics of protein-peptide interactions in the ribonuclease-S system studied by molecular dynamics and free energy calculations

cites work

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Demonstration of two reaction pathways for the aminoacylation of tRNA. Application of the pulsed quenched flow technique

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Solvent effects on protein motion and protein effects on solvent motion. Dynamics of the active site region of lysozyme

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

The ionic hydrogen bond and ion solvation. 5- OH.cntdot..cntdot..cntdot.O- bonds. Gas-phase solvation and clustering of alkoxide and carboxylate anions

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Hydrogen bonding in enzymatic catalysis analysed by protein engineering

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Use of binding energy in catalysis analyzed by mutagenesis of the tyrosyl-tRNA synthetase.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Three-dimensional structures of the ligand-binding domain of the bacterial aspartate receptor with and without a ligand

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Correlations between kinetic and X-ray analyses of engineered enzymes: crystal structures of mutants Cys----Gly-35 and Tyr----Phe-34 of tyrosyl-tRNA synthetase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Hidden thermodynamics of mutant proteins: a molecular dynamics analysis

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Kinetic and thermodynamic properties of wild-type and engineered mutants of tyrosyl-tRNA synthetase analyzed by pyrophosphate-exchange kinetics

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Can the stability of protein mutants be predicted by free energy calculations?

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

The fifth Datta Lecture. Structural similarities between the aspartate receptor of bacterial chemotaxis and the trp repressor of E. coli. Implications for transmembrane signaling

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

The three-dimensional structure of HLA-B27 at 2.1 A resolution suggests a general mechanism for tight peptide binding to MHC

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Estimating the contribution of engineered surface electrostatic interactions to protein stability by using double-mutant cycles

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Simulation analysis of the stability mutant R96H of T4 lysozyme.

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Hydrogen bonding and biological specificity analysed by protein engineering

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Thermodynamic cycle-perturbation study of the binding of trifluoroacetyl dipeptide anilide inhibitors with porcine pancreatic elastase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Binding energy and catalysis: a lesson from protein engineering of the tyrosyl-tRNA synthetase

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

High‐Temperature Equation of State by a Perturbation Method. I. Nonpolar Gases

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Polar hydrogen positions in proteins: Empirical energy placement and neutron diffraction comparison

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Relationships between apparent binding energies measured in site-directed mutagenesis experiments and energetics of binding and catalysis

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

1 reference

11 October 2022

https://opencitations.net/index/coci/api/v1/references/10.1016/0022-2836(94)90011-6

Identifiers

DOI

10.1016/0022-2836(94)90011-6

1 reference

26 February 2018

1 reference

26 February 2018