Evaluation of methods for detecting recombination from DNA sequences: computer simulations (Q33950030)

From Wikidata

Jump to navigation Jump to search

The printable version is no longer supported and may have rendering errors. Please update your browser bookmarks and please use the default browser print function instead.

scientific article

Language	Label	Description	Also known as
English	Evaluation of methods for detecting recombination from DNA sequences: computer simulations	scientific article

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Evaluation of methods for detecting recombination from DNA sequences: computer simulations (English)

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

computer simulation

1 reference

based on heuristic

inferred from title

1

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Keith A. Crandall

2

object named as

K A Crandall

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

language of work or name

0 references

publication date

1 November 2001

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Proceedings of the National Academy of Sciences of the United States of America

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

98

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

24

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

13757-13762

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

Among-site rate variation and its impact on phylogenetic analyses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Recombination in the hemagglutinin gene of the 1918 "Spanish flu".

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

A novel approach to detecting and measuring recombination: new insights into evolution in viruses, bacteria, and mitochondria

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Does recombination improve selection on codon usage? Lessons from nematode and fly complete genomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Recombination within natural populations of pathogenic bacteria: short-term empirical estimates and long-term phylogenetic consequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Consequences of recombination on traditional phylogenetic analysis.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Complex promoter and coding region beta 2-adrenergic receptor haplotypes alter receptor expression and predict in vivo responsiveness

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

The coalescent with gene conversion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

The detection and measurement of recombination from sequence data

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Evidence that a plant virus switched hosts to infect a vertebrate and then recombined with a vertebrate-infecting virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Phylogenetic evidence for recombination in dengue virus

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

The ancestry of a sample of sequences subject to recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

The effect of evenly spaced constant sites on the distribution of the random division of a molecular sequence

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Phylogenetic profiles: a graphical method for detecting genetic recombinations in homologous sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Ancestral inference from samples of DNA sequences with recombination.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

A program for calculating and displaying compatibility matrices as an aid in determining reticulate evolution in molecular sequences.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Recombination in AIDS viruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Evolutionary trees from DNA sequences: A maximum likelihood approach

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

The use of sample genealogies for studying a selectively neutral m-loci model with recombination.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Statistical properties of the number of recombination events in the history of a sample of DNA sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Dating of the human-ape splitting by a molecular clock of mitochondrial DNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Statistical methods of DNA sequence analysis: detection of intragenic recombination or gene conversion

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Genetic exchange among natural isolates of bacteria: recombination within the phoA gene of Escherichia coli

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Reconstructing evolution of sequences subject to recombination using parsimony

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Gene conversion in the evolution of the human and chimpanzee MHC class I loci

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

Analyzing the mosaic structure of genes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

5 July 2018

The influence of recombination on the population structure and evolution of the human pathogen Neisseria meningitidis

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241370698

21 January 2018

Unveiling the Molecular Clock in the Presence of Recombination

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241370698

21 January 2018

Detecting and characterizing gene conversions between multigene family members.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241370698

21 January 2018

A simulation study of the reliability of recombination detection methods.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241370698

21 January 2018

Recombination as a point process along sequences.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241370698

21 January 2018

A likelihood method for the detection of selection and recombination using nucleotide sequences

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241370698

21 January 2018

RDP: detection of recombination amongst aligned sequences

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241370698

21 January 2018

The partition matrix: exploring variable phylogenetic signals along nucleotide sequence alignments

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241370698

21 January 2018

Comments on the detection of reciprocal recombination or gene conversion.

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.241370698

21 January 2018

Genotyping, gene genealogies and genomics bring fungal population genetics above ground.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

29 October 2018

Statistical tests for detecting gene conversion.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=61114

29 October 2018

Recombination and the molecular clock

1 reference

https://pubmed.ncbi.nlm.nih.gov/11717435

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The power to detect recombination using the coalescent

1 reference

https://pubmed.ncbi.nlm.nih.gov/11717435

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DISTANCE METHODS FOR INFERRING PHYLOGENIES: A JUSTIFICATION

1 reference

https://pubmed.ncbi.nlm.nih.gov/11717435

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Properties of a neutral allele model with intragenic recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/11717435

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning

1 reference

https://pubmed.ncbi.nlm.nih.gov/11717435

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Detecting recombination from gene trees

1 reference

https://pubmed.ncbi.nlm.nih.gov/11717435

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1073/PNAS.241370698

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

2001PNAS...9813757P

0 references

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

30 July 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q33950030&oldid=2037305269"