Proteomics to study genes and genomes (Q33906818)

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scientific article

Language	Label	Description	Also known as
English	Proteomics to study genes and genomes	scientific article

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

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Europe PubMed Central

Proteomics to study genes and genomes (English)

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Europe PubMed Central

PubMed publication ID

29 July 2017

author name string

Pandey A

1

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Europe PubMed Central

PubMed publication ID

29 July 2017

Mann M

2

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Europe PubMed Central

PubMed publication ID

29 July 2017

language of work or name

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publication date

1 June 2000

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Europe PubMed Central

PubMed publication ID

29 July 2017

number of pages

10

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based on heuristic

inferred from page(s)

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Europe PubMed Central

PubMed publication ID

29 July 2017

405

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Europe PubMed Central

PubMed publication ID

29 July 2017

6788

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Europe PubMed Central

PubMed publication ID

29 July 2017

837-846

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Europe PubMed Central

PubMed publication ID

29 July 2017

Human 2-D PAGE databases for proteome analysis in health and disease: http://biobase.dk/cgi-bin/celis

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Twenty years of two-dimensional electrophoresis: past, present and future

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Structural genomics: beyond the human genome project

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Gene Finding: Putting the Parts Together

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The DNA sequence of human chromosome 22

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Computational methods for the identification of genes in vertebrate genomic sequences.

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Nucleotide sequence databases: a gold mine for biologists

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Errors in genome annotation

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Correlation between protein and mRNA abundance in yeast

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A sampling of the yeast proteome

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Identifying proteins from two-dimensional gels by molecular mass searching of peptide fragments in protein sequence databases

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Automation of matrix-assisted laser desorption/ionization mass spectrometry using fuzzy logic feedback control

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Reliable automatic protein identification from matrix-assisted laser desorption/ionization mass spectrometric peptide fingerprints

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Linking genome and proteome by mass spectrometry: large-scale identification of yeast proteins from two dimensional gels

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MALDI quadrupole time-of-flight mass spectrometry: a powerful tool for proteomic research

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Microfabricated devices for capillary electrophoresis-electrospray mass spectrometry.

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An integrated microfluidics-tandem mass spectrometry system for automated protein analysis

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Integration of microfabricated devices to capillary electrophoresis-electrospray mass spectrometry using a low dead volume connection: application to rapid analyses of proteolytic digests.

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Mass spectrometric analysis of blotted proteins after gel electrophoretic separation by matrix-assisted laser desorption/ionization

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Toward a Clinical Molecular Scanner for Proteome Research: Parallel Protein Chemical Processing before and during Western Blot

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A molecular scanner to automate proteomic research and to display proteome images

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Probing Proteomes Using Capillary Isoelectric Focusing-Electrospray Ionization Fourier Transform Ion Cyclotron Resonance Mass Spectrometry

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Sequence tag identification of intact proteins by matching tanden mass spectral data against sequence data bases

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Identification of intact proteins in mixtures by alternated capillary liquid chromatography electrospray ionization and LC ESI infrared multiphoton dissociation Fourier transform ion cyclotron resonance mass spectrometry.

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Electrospray ionization mass spectrometry of phosphopeptides isolated by on-line immobilized metal-ion affinity chromatography

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Identification of phosphorylation sites on neurofilament proteins by nanoelectrospray mass spectrometry

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Mapping of phosphorylation sites of gel-isolated proteins by nanoelectrospray tandem mass spectrometry: potentials and limitations

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Identification of phosphorylation sites in proteins separated by polyacrylamide gel electrophoresis

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Requirement of ATM-dependent phosphorylation of brca1 in the DNA damage response to double-strand breaks

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Functional proteomics analysis of signal transduction pathways of the platelet-derived growth factor beta receptor

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Analysis of receptor signaling pathways by mass spectrometry: identification of vav-2 as a substrate of the epidermal and platelet-derived growth factor receptors

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Exploring the metabolic and genetic control of gene expression on a genomic scale

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Molecular classification of cancer: class discovery and class prediction by gene expression monitoring

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Signaling and circuitry of multiple MAPK pathways revealed by a matrix of global gene expression profiles

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Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling

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Psoriasin (S100A7): a putative urinary marker for the follow-up of patients with bladder squamous cell carcinomas

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Proteomic definition of normal human luminal and myoepithelial breast cells purified from reduction mammoplasties

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Analysis of the mouse proteome. (I) Brain proteins: separation by two-dimensional electrophoresis and identification by mass spectrometry and genetic variation

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New insights into cyclosporine A nephrotoxicity by proteome analysis

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A comprehensive protein resource for the study of bladder cancer: http://biobase.dk/cgi-bin/celis

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Biological and immunological importance of Bet v 1 isoforms.

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Allergy to Aspergillus-derived enzymes in the baking industry: identification of beta-xylosidase from Aspergillus niger as a new allergen (Asp n 14).

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Protein microarrays for gene expression and antibody screening

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The use of bioreactive probes in protein characterization

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Quantitative analysis of complex protein mixtures using isotope-coded affinity tags

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Identification of the proteins of the yeast U1 small nuclear ribonucleoprotein complex by mass spectrometry

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Cell biology and the genome projects a concerted strategy for characterizing multiprotein complexes by using mass spectrometry

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Direct analysis of protein complexes using mass spectrometry

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Proteomics: quantitative and physical mapping of cellular proteins

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The mammalian gene collection

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Mass spectrometry and EST-database searching allows characterization of the multi-protein spliceosome complex

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The complex containing actin-related proteins Arp2 and Arp3 is required for the motility and integrity of yeast actin patches

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The yeast nuclear pore complex: composition, architecture, and transport mechanism

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Identification of in vivo substrates of the chaperonin GroEL

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In mouse brain profilin I and profilin II associate with regulators of the endocytic pathway and actin assembly

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A generic protein purification method for protein complex characterization and proteome exploration

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A generic strategy to analyze the spatial organization of multi-protein complexes by cross-linking and mass spectrometry.

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Applications of protein mass spectrometry in cell biology.

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Proteomics of the chloroplast: systematic identification and targeting analysis of lumenal and peripheral thylakoid proteins

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Purification and biochemical characterization of interchromatin granule clusters

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A novel genetic system to detect protein-protein interactions

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Protein interaction mapping in C. elegans using proteins involved in vulval development

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A comprehensive analysis of protein-protein interactions in Saccharomyces cerevisiae

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Toward a protein-protein interaction map of the budding yeast: A comprehensive system to examine two-hybrid interactions in all possible combinations between the yeast proteins

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Prospects for drug screening using the reverse two-hybrid system

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Mapping signal transduction pathways by phage display.

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Phage display of cDNA repertoires: the pVI display system and its applications for the selection of immunogenic ligands

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A biochemical genomics approach for identifying genes by the activity of their products.

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Disruption and sequence identification of 2,000 genes in mouse embryonic stem cells

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Potent and specific genetic interference by double-stranded RNA in Caenorhabditis elegans

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Functional characterization of the S. cerevisiae genome by gene deletion and parallel analysis

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An in vitro polysome display system for identifying ligands from very large peptide libraries

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RNA-peptide fusions for the in vitro selection of peptides and proteins

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Analytical properties of the nanoelectrospray ion source

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Femtomole sequencing of proteins from polyacrylamide gels by nano-electrospray mass spectrometry

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Proposal for a common nomenclature for sequence ions in mass spectra of peptides

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Mass spectrometry. From genomics to proteomics

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Error-tolerant identification of peptides in sequence databases by peptide sequence tags

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A shortcut to interesting human genes: peptide sequence tags, expressed-sequence tags and computers

1 reference

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An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database

1 reference

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Database searching using mass spectrometry data

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Identifiers

10.1038/35015709

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

Dimensions Publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

29 July 2017

ResearchGate publication ID

0 references

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