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SRDTrans: Spatial redundancy transformer for self-supervised fluorescence image denoising

Python 68 8 Updated Aug 27, 2024
HTML 1 Updated Dec 30, 2022
Julia 21 2 Updated Jul 24, 2024

A set of functions to support the development of machine learning algorithms

Julia 185 63 Updated Aug 17, 2023

Interactive deep learning whole-cell segmentation and thresholding using partial annotations

Jupyter Notebook 34 3 Updated Nov 4, 2024

Annotate better with CVAT, the industry-leading data engine for machine learning. Used and trusted by teams at any scale, for data of any scale.

Python 12,623 3,010 Updated Nov 18, 2024

MONAI Tutorials

Jupyter Notebook 1,860 684 Updated Nov 15, 2024

Democratizing Deep-Learning for Drug Discovery, Quantum Chemistry, Materials Science and Biology

Python 5,518 1,686 Updated Nov 12, 2024

Introduction to Scientific Programming and Machine Learning with Julia

Julia 51 7 Updated Sep 22, 2024

Julia implementation of the scikit-learn API https://cstjean.github.io/ScikitLearn.jl/dev/

Julia 545 76 Updated Jun 22, 2023

Connected components on discrete and continuous multilabel 3D & 2D images. Handles 26, 18, and 6 connected variants; periodic boundaries (4, 8, & 6)

C++ 371 43 Updated Nov 17, 2024

Enveloppe helps you to publish your notes on a GitHub repository from your Obsidian Vault, for free!

TypeScript 654 39 Updated Oct 13, 2024

Receiver Operating Characteristic (ROC) Curve for Julia Language

Julia 18 7 Updated Feb 8, 2020

Receiver Operating Characteristics and functions for evaluation probabilistic binary classifiers

Jupyter Notebook 32 10 Updated Sep 15, 2023

Unsupervised Learning for Image Registration

Python 2,306 581 Updated Sep 20, 2024

An open-source application for biological image analysis

Python 923 376 Updated Nov 15, 2024

a generalist algorithm for cellular segmentation with human-in-the-loop capabilities

Jupyter Notebook 1,385 400 Updated Oct 30, 2024

Deep Learning Library for Single Cell Analysis

Python 424 99 Updated Aug 30, 2024

Multiple-choice microscopy pipeline

Nextflow 111 58 Updated Oct 18, 2024

ASHLAR: Alignment by Simultaneous Harmonization of Layer/Adjacency Registration

Python 127 42 Updated Sep 2, 2024

Conduct one-way and multi-way anova in Julia with GLM.jl

Julia 5 Updated Feb 28, 2024

A versatile image analysis software for biological image-based quantification using machine learning, especially for whole slide imaging.

Java 61 14 Updated Apr 16, 2021

Programming of Simulation, Analysis, and Learning Systems Course Materials

Jupyter Notebook 34 59 Updated Oct 21, 2024

Code for the 3d neuromast cell and nuclear shape project

Python 2 Updated Jul 14, 2023

Analysis of data produced by cvapipe for the variance paper

Jupyter Notebook 22 6 Updated Nov 11, 2024

Notes on Using Julia for Introductory Statistics

HTML 4 Updated Oct 7, 2024

Support package for doing Calculus with Julia

Julia 60 11 Updated Nov 7, 2024

Helper files for using `Julia` with MTH229.

Julia 14 2 Updated Jun 8, 2024

A Julia package for producing publication quality figures based on Makie.jl.

Julia 111 7 Updated Aug 14, 2024
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