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[Building from source with bazel] Failure when linking libm-libraries during compilation of flatbuffers #73798

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hanssssssssssssss opened this issue Aug 14, 2024 · 4 comments
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[Building from source with bazel] Failure when linking libm-libraries during compilation of flatbuffers #73798

hanssssssssssssss opened this issue Aug 14, 2024 · 4 comments
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@Venkat6871
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2.17 Issues related to 2.17 release stale This label marks the issue/pr stale - to be closed automatically if no activity stat:awaiting response Status - Awaiting response from author subtype: ubuntu/linux Ubuntu/Linux Build/Installation Issues type:build/install Build and install issues

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@hanssssssssssssss
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Issue type

Build/Install

Have you reproduced the bug with TensorFlow Nightly?

No

Source

source

TensorFlow version

2.17

Custom code

No

OS platform and distribution

Linux Debian 5.10.216-1 x86_64

Mobile device

No response

Python version

3.12

Bazel version

7.3.0

GCC/compiler version

clang 17.0.2

CUDA/cuDNN version

CUDA 12 /cuDNN 8

GPU model and memory

NVIDIA A2

Current behavior?

I'm trying to build tensorflow from source with bazel for use in a C++ project. I'm working in a conda environment wit the specifics mentioned above and try to compile the libraries with the following command:

bazel build //tensorflow:libtensorflow_cc.so //tensorflow:libtensorflow_framework.so

Bazel fails with the follwing error message:

ERROR: /my/home/path/cache/bazel/_bazel_myuser/45c6a78e7c7688232d885d39238fef70/external/flatbuffers/BUILD.bazel:84:10: Linking external/flatbuffers/flatc [for tool] failed: (Exit 1): clang-17 failed: error executing command (from target @flatbuffers//:flatc) /my/home/path/.conda/envs/poet/bin/clang-17 @bazel-out/k8-opt-exec-50AE0418/bin/external/flatbuffers/flatc-2.params
/usr/bin/ld: warning: /my/home/path/.conda/envs/poet/bin/../lib/gcc/x86_64-conda-linux-gnu/14.1.0/crtbeginS.o: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010002
/usr/bin/ld: warning: /my/home/path/.conda/envs/poet/bin/../lib/gcc/x86_64-conda-linux-gnu/14.1.0/crtbeginS.o: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010001
/usr/bin/ld: cannot find /lib64/libm.so.6 inside /
/usr/bin/ld: cannot find /usr/lib64/libmvec_nonshared.a inside /
/usr/bin/ld: cannot find /lib64/libmvec.so.1 inside /
clang-17: error: linker command failed with exit code 1 (use -v to see invocation)

I tried to add the following lines to .bazelrc to explicitly link the locations of the libraries that were not found. That did not change the error.

build:linux --linkopt=-L/mnt/beegfs/home/straile/.conda/envs/poet/x86_64-conda-linux-gnu/sysroot/lib64
build:linux --linkopt=-L/mnt/beegfs/home/straile/.conda/envs/poet/x86_64-conda-linux-gnu/sysroot/usr/lib64
build:linux --linkopt=-Wl,-rpath,/mnt/beegfs/home/straile/.conda/envs/poet/x86_64-conda-linux-gnu/sysroot/lib64
build:linux --linkopt=-Wl,-rpath,/mnt/beegfs/home/straile/.conda/envs/poet/x86_64-conda-linux-gnu/sysroot/usr/lib64

Any help on this issue is much appreciated.

Standalone code to reproduce the issue

git clone https://github.com/tensorflow/tensorflow.git
cd tensorflow
git checkout r2.17
./configure 
# [with CUDA version 12, cuDNN version 8, NCCL version 2.18, compute capabilities 8.6]
# I also had to add "linux:build --copt=-Qunused-arguments" to .bazelrc to ignore compile errors in protoc
bazel build //tensorflow:libtensorflow_cc.so //tensorflow:libtensorflow_framework.so

Relevant log output

No response
@google-ml-butler google-ml-butler bot added the type:build/install Build and install issues label Aug 14, 2024
@Venkat6871 Venkat6871 added 2.17 Issues related to 2.17 release subtype: ubuntu/linux Ubuntu/Linux Build/Installation Issues labels Aug 16, 2024
@Venkat6871
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Hi @hanssssssssssssss ,

  • Apologies for the delay. This might be due to a version incompatibility. Please verify version compatibility using the attached documentation. Let me know if the issue persists.

Thank you!

@Venkat6871 Venkat6871 added the stat:awaiting response Status - Awaiting response from author label Aug 19, 2024
@github-actions GitHub Actions
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This issue is stale because it has been open for 7 days with no activity. It will be closed if no further activity occurs. Thank you.

@github-actions github-actions bot added the stale This label marks the issue/pr stale - to be closed automatically if no activity label Aug 27, 2024
@github-actions GitHub Actions
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github-actions bot commented Sep 3, 2024

This issue was closed because it has been inactive for 7 days since being marked as stale. Please reopen if you'd like to work on this further.

@github-actions github-actions bot closed this as completed Sep 3, 2024
@google-ml-butler Google-ML-Butler
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@Venkat6871 Venkat6871

Labels
2.17 Issues related to 2.17 release stale This label marks the issue/pr stale - to be closed automatically if no activity stat:awaiting response Status - Awaiting response from author subtype: ubuntu/linux Ubuntu/Linux Build/Installation Issues type:build/install Build and install issues
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@hanssssssssssssss @Venkat6871