clonality

Here are 7 public repositories matching this topic...

FunGeST / Palimpsest

An R package for studying mutational signatures and structural variant signatures along clonal evolution in cancer.

visualization bioinformatics r genomics cancer-genomics clonality somatic-mutations nmf cancer-research bioinformatics-analysis structural-variation tumor-evolution mutational-signatures tumor-heterogeneity signature-extraction nmf-extraction structural-variant-signatures driver-events

Updated May 23, 2024
R

grunwaldlab / poppr

Star

🌶 An R package for genetic analysis of populations with mixed (clonal/sexual) reproduction

r multilocus-genotypes genetic-distances population-genetics multilocus-lineages genetic-analysis populations minimum-spanning-networks clonality

Updated May 16, 2024
R

davismcc / fibroblast-clonality

Star

Website for the fibroblast clonality project conducted at EMBL-EBI and the Wellcome Sanger Institute ca 2017-2019.

clonality single-cell-rna-seq single-cell-omics fibroblast-clonality

Updated Oct 30, 2019
R

asalavaty / AutoClone

Star

Calculation of clonality (distances) based on color profiles (Saturation, Hue, and Lightness values)

clonality lineage-tracing clonal-analysis

Updated Sep 8, 2022
R

Subhayan18 / CRUST

Star

R package for clonal deconvolution

phylogenetics clonality deconvolution subclone-identification vaf-distribution subclone

Updated Jul 8, 2021
R

Astahlke / whitetop_clonality

Star

Reopsitory with raw data and code to analyse the relationship between environmental conditions and clonality in Lepidium draba.

clonality genetic-data

Updated Sep 2, 2020
R

cpatarroyo / agrostatistics

Star

R library for the analysis of partially clonal populations of polyploid individuals

population-genetics clonality phytophthora-infestans

Updated Sep 9, 2024
R

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clonality

Here are 7 public repositories matching this topic...

FunGeST / Palimpsest

grunwaldlab / poppr

davismcc / fibroblast-clonality

asalavaty / AutoClone

Subhayan18 / CRUST

Astahlke / whitetop_clonality

cpatarroyo / agrostatistics

Improve this page

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