Candidate OPC–endothelial cell interactors

Bio4j abstract model and general entry point to the project

GO prediction by STRING protein-protein interaction

GOfreq: GO prediction by BLAST and PSIBLAST sequence search

Plot gene ontologies

R Package for Gene Ontology Label Discernment and Identification.

Material for GO OWL/Protege Tutorial

ChIP-seq/RNA-seq analysis software suite for gene expression heatmaps

Kay Prüfer’s FUNC — a package for detecting significant associations between gene sets and ontological annotations

Gene ontology (GO) semantic similarity library for Python

This module is responsible for displaying reports from Gene Ontology (GO) analyses. This module contains a Gene Ontology Annotation Format (GAF) file loader to import GO terms assigned to features. Otherwise, GO assignments must already be loaded into the Tripal database using other data loaders (e.g. using the Tripal InterPro Analysis module or…

Set of small R scripts helpful in various bioinformatics projects

An R package for RNA-seq DGE downstream automation and clustering analysis

This is a version of topGO using roxygen2 and Rmd

Simple utility functions for handling GO Terms in Python.

A Bio2BEL package for converting the Gene Ontology (GO) to BEL

GO Term Visualizations

Python and R programs used in the identification of repurposed drugs against viruses responsible for causing epidemics/pandemics

GO enrichment with python -- pandas meets networkx