Pages that link to "Q33515789"
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The following pages link to Sole-Search: an integrated analysis program for peak detection and functional annotation using ChIP-seq data (Q33515789):
Displaying 50 items.
- Evaluation of algorithm performance in ChIP-seq peak detection (Q21136324) (← links)
- ZNF274 recruits the histone methyltransferase SETDB1 to the 3' ends of ZNF genes (Q24318366) (← links)
- DNA-binding motif and target genes of the imprinted transcription factor PEG3 (Q24603732) (← links)
- Selective regulation of lymphopoiesis and leukemogenesis by individual zinc fingers of Ikaros (Q24607867) (← links)
- Uncovering transcription factor modules using one- and three-dimensional analyses (Q26862955) (← links)
- Bipartite recognition of DNA by TCF/Pangolin is remarkably flexible and contributes to transcriptional responsiveness and tissue specificity of wingless signaling (Q27313692) (← links)
- Wnt-signalling pathways and microRNAs network in carcinogenesis: experimental and bioinformatics approaches (Q28077396) (← links)
- Autophagy driven by a master regulator of hematopoiesis (Q28251370) (← links)
- Misregulation of Alternative Splicing in a Mouse Model of Rett Syndrome (Q28552209) (← links)
- Features that define the best ChIP-seq peak calling algorithms (Q30387991) (← links)
- A signal processing approach for enriched region detection in RNA polymerase II ChIP-seq data (Q30466536) (← links)
- Accounting for immunoprecipitation efficiencies in the statistical analysis of ChIP-seq data (Q30636277) (← links)
- A survey of motif finding Web tools for detecting binding site motifs in ChIP-Seq data (Q30761131) (← links)
- Statistical Issues in the Analysis of ChIP-Seq and RNA-Seq Data (Q30795515) (← links)
- PePr: a peak-calling prioritization pipeline to identify consistent or differential peaks from replicated ChIP-Seq data. (Q30828757) (← links)
- Modeling transcriptional networks regulating secondary growth and wood formation in forest trees (Q33356696) (← links)
- Using ChIP-seq technology to identify targets of zinc finger transcription factors (Q33648141) (← links)
- Genome-wide binding of the orphan nuclear receptor TR4 suggests its general role in fundamental biological processes (Q33761854) (← links)
- OccuPeak: ChIP-Seq peak calling based on internal background modelling (Q33768883) (← links)
- seqMINER: an integrated ChIP-seq data interpretation platform (Q33777909) (← links)
- WordSeeker: concurrent bioinformatics software for discovering genome-wide patterns and word-based genomic signatures (Q33787356) (← links)
- Characterization of the contradictory chromatin signatures at the 3' exons of zinc finger genes (Q33828243) (← links)
- An integrated pipeline for the genome-wide analysis of transcription factor binding sites from ChIP-Seq. (Q33831801) (← links)
- Global analysis of ZNF217 chromatin occupancy in the breast cancer cell genome reveals an association with ERalpha (Q33848844) (← links)
- PeakRanger: a cloud-enabled peak caller for ChIP-seq data (Q33893293) (← links)
- Discovering transcription factor binding sites in highly repetitive regions of genomes with multi-read analysis of ChIP-Seq data (Q33967929) (← links)
- ZINBA integrates local covariates with DNA-seq data to identify broad and narrow regions of enrichment, even within amplified genomic regions (Q33970447) (← links)
- Using ChIP-seq technology to generate high-resolution profiles of histone modifications (Q34018110) (← links)
- Epigenetically coordinated GATA2 binding is necessary for endothelium-specific endomucin expression (Q34027281) (← links)
- Fish the ChIPs: a pipeline for automated genomic annotation of ChIP-Seq data. (Q34042235) (← links)
- A novel role for the Pol I transcription factor UBTF in maintaining genome stability through the regulation of highly transcribed Pol II genes (Q34042569) (← links)
- Genome-wide mapping of Sox6 binding sites in skeletal muscle reveals both direct and indirect regulation of muscle terminal differentiation by Sox6. (Q34045389) (← links)
- SGLT1, a novel cardiac glucose transporter, mediates increased glucose uptake in PRKAG2 cardiomyopathy (Q34101200) (← links)
- Genome-wide mapping of RNA Pol-II promoter usage in mouse tissues by ChIP-seq. (Q34138138) (← links)
- Comparison of sequencing-based methods to profile DNA methylation and identification of monoallelic epigenetic modifications. (Q34138823) (← links)
- Identification of {beta}-catenin binding regions in colon cancer cells using ChIP-Seq (Q34146269) (← links)
- USF binding sequences from the HS4 insulator element impose early replication timing on a vertebrate replicator. (Q34192757) (← links)
- Analysis of an artificial zinc finger epigenetic modulator: widespread binding but limited regulation (Q34249565) (← links)
- Integration of Hi-C and ChIP-seq data reveals distinct types of chromatin linkages (Q34295341) (← links)
- Functional annotation of colon cancer risk SNPs (Q34357186) (← links)
- Global loss of DNA methylation uncovers intronic enhancers in genes showing expression changes (Q34374752) (← links)
- In silico pooling of ChIP-seq control experiments (Q34472763) (← links)
- Combining multiple ChIP-seq peak detection systems using combinatorial fusion (Q34530154) (← links)
- Co-occupancy by multiple cardiac transcription factors identifies transcriptional enhancers active in heart. (Q34805195) (← links)
- Wide-ranging functions of E2F4 in transcriptional activation and repression revealed by genome-wide analysis (Q34947016) (← links)
- Past visits present: TCF/LEFs partner with ATFs for β-catenin-independent activity (Q34962032) (← links)
- Integrative genomic analysis of human ribosomal DNA. (Q35087988) (← links)
- Functional analysis of KAP1 genomic recruitment (Q35096261) (← links)
- Widespread FRA1-dependent control of mesenchymal transdifferentiation programs in colorectal cancer cells (Q35128358) (← links)
- The spatiotemporal program of DNA replication is associated with specific combinations of chromatin marks in human cells (Q35160747) (← links)