The spliced leader-associated RNA is a trypanosome-specific sn(o) RNA that has the potential to guide pseudouridine formation on the SL RNA. (Q24540083)

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English	The spliced leader-associated RNA is a trypanosome-specific sn(o) RNA that has the potential to guide pseudouridine formation on the SL RNA.	scientific article

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

The spliced leader-associated RNA is a trypanosome-specific sn(o) RNA that has the potential to guide pseudouridine formation on the SL RNA. (English)

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

author name string

Xue-Hai Liang

1

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

Yu-Xin Xu

2

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

Shulamit Michaeli

3

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

language of work or name

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publication date

1 February 2002

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

8

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

2

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

237-246

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

A small nucleolar guide RNA functions both in 2'-O-ribose methylation and pseudouridylation of the U5 spliceosomal RNA

1 reference

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Nucleolar factors direct the 2'-O-ribose methylation and pseudouridylation of U6 spliceosomal RNA

1 reference

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Nop58p is a common component of the box C+D snoRNPs that is required for snoRNA stability

1 reference

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Cbf5p, a potential pseudouridine synthase, and Nhp2p, a putative RNA-binding protein, are present together with Gar1p in all H BOX/ACA-motif snoRNPs and constitute a common bipartite structure.

1 reference

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Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs

1 reference

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24 March 2017

Identification of the first trypanosome H/ACA RNA that guides pseudouridine formation on rRNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

24 March 2017

Fibrillarin-associated box C/D small nucleolar RNAs in Trypanosoma brucei. Sequence conservation and implications for 2'-O-ribose methylation of rRNA

1 reference

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Saccharomyces cerevisiae telomerase is an Sm small nuclear ribonucleoprotein particle

1 reference

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Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs

1 reference

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The family of box ACA small nucleolar RNAs is defined by an evolutionarily conserved secondary structure and ubiquitous sequence elements essential for RNA accumulation

1 reference

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24 March 2017

Newly assembled snRNPs associate with coiled bodies before speckles, suggesting a nuclear snRNP maturation pathway

1 reference

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A box H/ACA small nucleolar RNA-like domain at the human telomerase RNA 3' end

1 reference

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Sno storm in the nucleolus: new roles for myriad small RNPs

1 reference

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7 April 2017

Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

7 April 2017

Function and synthesis of small nucleolar RNAs

1 reference

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The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions

1 reference

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Transient nucleolar localization Of U6 small nuclear RNA in Xenopus Laevis oocytes

1 reference

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A new twist in trypanosome RNA metabolism: cis-splicing of pre-mRNA.

1 reference

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Cloning and mutational analysis of the Leptomonas seymouri U5 snRNA gene: function of the Sm site in core RNP formation and nuclear localization

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

27 September 2017

Modification of U6 spliceosomal RNA is guided by other small RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

27 September 2017

Three small nucleolar RNAs identified from the spliced leader-associated RNA locus in kinetoplastid protozoans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

27 September 2017

Structure-function analysis of the trypanosomatid spliced leader RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

27 September 2017

Characterization of a novel trypanosomatid small nucleolar RNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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The U5 RNA of trypanosomes deviates from the canonical U5 RNA: the Leptomonas collosoma U5 RNA and its coding gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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Localization of modified nucleotides in Schizosaccharomyces pombe spliceosomal small nuclear RNAs: modified nucleotides are clustered in functionally important regions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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Evidence for the presence of a small U5-like RNA in active trans-spliceosomes of Trypanosoma brucei

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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Upstream tRNA genes are essential for expression of small nuclear and cytoplasmic RNA genes in trypanosomes

1 reference

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In vivo structural analysis of spliced leader RNAs in Trypanosoma brucei and Leptomonas collosoma: a flexible structure that is independent of cap4 methylations

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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Trypanosome mRNAs have unusual "cap 4" structures acquired by addition of a spliced leader

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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Isolation and sequence of four small nuclear U RNA genes of Trypanosoma brucei subsp. brucei: identification of the U2, U4, and U6 RNA analogs

1 reference

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Direct analysis of the mini-exon donor RNA of Trypanosoma brucei: detection of a novel cap structure also present in messenger RNA.

1 reference

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Permeable trypanosome cells as a model system for transcription and trans-splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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Trans splicing of nuclear pre-mRNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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Trans splicing in trypanosomes requires methylation of the 5' end of the spliced leader RNA

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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Modifications of U2 snRNA are required for snRNP assembly and pre-mRNA splicing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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The SLA RNA gene of Trypanosoma brucei is organized in a tandem array which encodes several small RNAs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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Four newly located pseudouridylate residues in Escherichia coli 23S ribosomal RNA are all at the peptidyltransferase center: analysis by the application of a new sequencing technique.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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Expression studies on clustered trypanosomatid box C/D small nucleolar RNAs

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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Structural conservation and variation among U5 small nuclear RNAs from trypanosomatid protozoa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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Spliced leader-associated RNA from Crithidia fasciculata contains a structure resembling stem/loop II of U1 snRNA.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

29 November 2018

A candidate U1 small nuclear RNA for trypanosomatid protozoa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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Identification of a small RNA that interacts with the 5' splice site of the Trypanosoma brucei spliced leader RNA in vivo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

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Spliced leader-associated RNA of trypanosomes. Sequence conservation and association with protein components common to trans-spliceosomal ribonucleoproteins

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370245

29 November 2018

Functional analyses of positions across the 5' splice site of the trypanosomatid spliced leader RNA. Implications for base-pair interaction with U5 and U6 snRNAs

1 reference

https://pubmed.ncbi.nlm.nih.gov/11911368

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Cotranscriptional Cap 4 Formation on theTrypanosoma bruceiSpliced Leader RNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/11911368

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Dynamic exchanges of RNA interactions leading to catalytic core formation in the U12-dependent spliceosome

1 reference

https://pubmed.ncbi.nlm.nih.gov/11911368

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Destruction of U2, U4, or U6 small nuclear RNA blocks trans splicing in trypanosome cells

1 reference

https://pubmed.ncbi.nlm.nih.gov/11911368

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Karyotype analysis of the monogenetic trypanosomatid Leptomonas collosoma

1 reference

https://pubmed.ncbi.nlm.nih.gov/11911368

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Stable transfection in the monogenetic trypanosomatid Leptomonas collosoma--transcription barrier of heterologous trypanosomatid SL RNA genes and expression of a chimeric SL RNA molecule

1 reference

https://pubmed.ncbi.nlm.nih.gov/11911368

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1017/S1355838202018290

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

PMC publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

6 July 2017

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