iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution (Q24630078)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20601959%20AND%20SRC:MED&resulttype=core&format=json

7 February 2020

title

iCLIP reveals the function of hnRNP particles in splicing at individual nucleotide resolution (English)

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7 February 2020

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1

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7 February 2020

Kathi Zarnack

2

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7 February 2020

Tomaž Curk

4

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7 February 2020

Blaž Zupan

6

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7 February 2020

Jernej Ule

9

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7 February 2020

author name string

Gregor Rot

3

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7 February 2020

Melis Kayikci

5

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7 February 2020

Daniel J Turner

7

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7 February 2020

Nicholas M Luscombe

8

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7 February 2020

language of work or name

English

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publication date

4 July 2010

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Nature Structural & Molecular Biology

7 February 2020

published in

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7 February 2020

volume

17

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7 February 2020

issue

7

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7 February 2020

page(s)

909-915

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

7 February 2020

cites work

1 reference

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An RNA code for the FOX2 splicing regulator revealed by mapping RNA-protein interactions in stem cells

7 April 2017

1 reference

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HITS-CLIP yields genome-wide insights into brain alternative RNA processing

7 April 2017

1 reference

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The C-protein tetramer binds 230 to 240 nucleotides of pre-mRNA and nucleates the assembly of 40S heterogeneous nuclear ribonucleoprotein particles

7 April 2017

1 reference

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Interaction of the RNA-binding domain of the hnRNP C proteins with RNA

7 April 2017

1 reference

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WebLogo: A Sequence Logo Generator

7 April 2017

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The spliceosome: design principles of a dynamic RNP machine

7 April 2017

1 reference

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Genome-wide analysis of PTB-RNA interactions reveals a strategy used by the general splicing repressor to modulate exon inclusion or skipping

7 April 2017

1 reference

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CLIP: a method for identifying protein-RNA interaction sites in living cells

7 April 2017

1 reference

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CLIP identifies Nova-regulated RNA networks in the brain

7 April 2017

1 reference

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Expansion of the eukaryotic proteome by alternative splicing

7 April 2017

1 reference

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Mechanisms of alternative splicing regulation: insights from molecular and genomics approaches

7 April 2017

1 reference

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7 April 2017

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Distinct binding specificities and functions of higher eukaryotic polypyrimidine tract-binding proteins

7 April 2017

1 reference

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Structure of PTB bound to RNA: specific binding and implications for splicing regulation

7 April 2017

1 reference

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Nova regulates brain-specific splicing to shape the synapse

27 September 2017

1 reference

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Heterogeneous nuclear ribonucleoprotein C modulates translation of c-myc mRNA in a cell cycle phase-dependent manner

27 September 2017

1 reference

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A two-tracked approach to analyze RNA-protein crosslinking sites in native, nonlabeled small nuclear ribonucleoprotein particles

27 September 2017

1 reference

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Mutational definition of RNA-binding and protein-protein interaction domains of heterogeneous nuclear RNP C1.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3000544

Mechanisms of fidelity in pre-mRNA splicing

27 September 2017

1 reference

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Laser cross-linking of proteins to nucleic acids. I. Examining physical parameters of protein-nucleic acid complexes

27 September 2017

1 reference

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Smooth muscle-specific switching of alpha-tropomyosin mutually exclusive exon selection by specific inhibition of the strong default exon.

27 September 2017

1 reference

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Arrangement of 30S Heterogeneous Nuclear Ribonucleoprotein on Polyoma Virus Late Nuclear Transcripts

27 September 2017

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Laser cross-linking of nucleic acids to proteins. Methodology and first applications to the phage T4 DNA replication system.

27 September 2017

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The C proteins of HeLa 40S nuclear ribonucleoprotein particles exist as anisotropic tetramers of (C1)3 C2.

27 September 2017

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Independent deposition of heterogeneous nuclear ribonucleoproteins and small nuclear ribonucleoprotein particles at sites of transcription

27 September 2017

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A major determinant of hnRNP C protein binding to RNA is a novel bZIP-like RNA binding domain

27 September 2017

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Mutation of the gene encoding protein kinase C 1 stimulates mitotic recombination in Saccharomyces cerevisiae

30 May 2018

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An RNA map predicting Nova-dependent splicing regulation

21 January 2018

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The determinants of RNA-binding specificity of the heterogeneous nuclear ribonucleoprotein C proteins.

28 November 2018

1 reference

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Identification and characterization of the packaging proteins of core 40S hnRNP particles

28 November 2018

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Nucleolin and heterogeneous nuclear ribonucleoprotein C proteins specifically interact with the 3'-untranslated region of amyloid protein precursor mRNA

31 March 2020

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Solution structure of the symmetric coiled coil tetramer formed by the oligomerization domain of hnRNP C: implications for biological function

31 March 2020

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Proteins C1 and C2 of heterogeneous nuclear ribonucleoprotein complexes bind RNA in a highly cooperative fashion: support for their contiguous deposition on pre-mRNA during transcription

31 March 2020

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Heterogeneous nuclear ribonucleoproteins: role in RNA splicing

31 March 2020

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31 March 2020

Identifiers

DOI

10.1038/NSMB.1838

2 references

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Dimensions Publication ID

7 February 2020

1009634080

0 references

1 reference

2 references

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7 February 2020

PubMed publication ID

20601959

2 references