GeNMR: a web server for rapid NMR-based protein structure determination (Q24655445)

1

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Peter Tang

2

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Jack Liang

3

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Joseph A Cruz

4

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Jianjun Zhou

5

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You Zhou

6

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Edward Bassett

7

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Cam MacDonell

8

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Paul Lu

9

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Guohui Lin

CS23D: a web server for rapid protein structure generation using NMR chemical shifts and sequence data

10

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language of work or name

English

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publication date

July 2009

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published in

Nucleic Acids Research

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volume

37

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issue

Web Server issue

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page(s)

W670-7

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cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

PROTEUS2: a web server for comprehensive protein structure prediction and structure-based annotation

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

Consistent blind protein structure generation from NMR chemical shift data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

PREDITOR: a web server for predicting protein torsion angle restraints

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

7 April 2017

1 reference

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Automated NOESY interpretation with ambiguous distance restraints: the refined NMR solution structure of the pleckstrin homology domain from beta-spectrin

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

Automated NMR structure calculation with CYANA

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

The Xplor-NIH NMR molecular structure determination package

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

Crystallography & NMR System: A New Software Suite for Macromolecular Structure Determination

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

Torsion angle dynamics for NMR structure calculation with the new program DYANA

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

The 13C chemical-shift index: a simple method for the identification of protein secondary structure using 13C chemical-shift data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and Bayesian scoring functions

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

PPT-DB: the protein property prediction and testing database.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

Protein structure determination from NMR chemical shifts

28 September 2017

1 reference

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Growth of novel protein structural data.

28 September 2017

1 reference

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A simple method to predict protein flexibility using secondary chemical shifts

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

Residual dipolar couplings in structure determination of biomolecules

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

NMR - this other method for protein and nucleic acid structure determination.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

Rapid and accurate calculation of protein 1H, 13C and 15N chemical shifts

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

RefDB: a database of uniformly referenced protein chemical shifts

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

Use of chemical shifts in macromolecular structure determination

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

WebMol--a Java-based PDB viewer.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

An empirical energy function for threading protein sequence through the folding motif

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

GENFOLD: a genetic algorithm for folding protein structures using NMR restraints

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2703936

Local knowledge helps determine protein structures

30 May 2018

1 reference

5 May 2024

https://opencitations.net/index/api/v1/references/10.1093/NAR/GKP280

Identifiers

DOI

10.1093/NAR/GKP280

0 references

DBLP publication ID

journals/nar/BerjanskiiTLCZZBMLLW09

1 reference

DBLP Dataset 2021-01-02

release_4emhzmmtzbbaxksgc2f5uh7wie

28 January 2021

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/4emhzmmtzbbaxksgc2f5uh7wie