Feature extraction and signal processing for nylon DNA microarrays (Q24791649)

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30 December 2019

title

Feature extraction and signal processing for nylon DNA microarrays (English)

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30 December 2019

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2

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30 December 2019

Beatrice Loriod

3

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30 December 2019

Pascal Hingamp

7

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30 December 2019

Samuel Granjeaud

9

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30 December 2019

author name string

Lopez F

1

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30 December 2019

Bourgeois A

4

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30 December 2019

Loï L

5

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30 December 2019

Bertucci F

6

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30 December 2019

Houlgatte R

8

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30 December 2019

language of work or name

English

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publication date

29 June 2004

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30 December 2019

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30 December 2019

volume

5

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30 December 2019

issue

1

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30 December 2019

page(s)

38

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Evaluation of gene expression measurements from commercial microarray platforms

30 December 2019

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Design and implementation of microarray gene expression markup language (MAGE-ML)

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Microarray results: how accurate are they?

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Cluster analysis and display of genome-wide expression patterns

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Minimum information about a microarray experiment (MIAME)-toward standards for microarray data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Gene expression patterns of breast carcinomas distinguish tumor subclasses with clinical implications

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Distinct types of diffuse large B-cell lymphoma identified by gene expression profiling

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Molecular classification of cancer: class discovery and class prediction by gene expression monitoring

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Gene-expression profiles predict survival of patients with lung adenocarcinoma

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Small lymphocytic lymphoma, marginal zone B-cell lymphoma, and mantle cell lymphoma exhibit distinct gene-expression profiles allowing molecular diagnosis

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Gene expression profiling identifies tumour markers potentially playing a role in uveal melanoma development.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Advantages and limitations of microarray technology in human cancer

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Improving DNA array data quality by minimising 'neighbourhood' effects.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Development of high-density DNA microarray membrane for profiling smoke- and hydrogen peroxide-induced genes in a human bronchial epithelial cell line

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Statistical evaluation of differential expression on cDNA nylon arrays with replicated experiments

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Applications of nylon membrane arrays to gene expression analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Processing and quality control of DNA array hybridization data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Quantitative analysis of DNA array autoradiographs

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Normalization strategies for cDNA microarrays

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

One-stop shop for microarray data

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Differential gene expression in the murine thymus assayed by quantitative hybridization of arrayed cDNA clones.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Quantification of DNA probes on nylon microarrays using T4 polynucleotide kinase labeling

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Xdigitise: visualization of hybridization experiments.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Sharpening spots: correcting for bleedover in cDNA array images.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Robust parametric and semi-parametric spot fitting for spot array images

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

Automatic reading of hybridization filter images.

28 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=471548

From hybridization image to numerical values: a practical, high throughput quantification system for high density filter hybridizations

28 November 2018

1 reference

12 December 2020

Sensitivity issues in DNA array-based expression measurements and performance of nylon microarrays for small samples

1 reference

12 December 2020

Expression scanning of an array of growth control genes in human tumor cell lines

1 reference

12 December 2020

On the Importance of Standardisation in Life Sciences

1 reference

12 December 2020

Expression microarray hybridization kinetics depend on length of the immobilized DNA but are independent of immobilization substrate

1 reference

12 December 2020

Gene expression profiles of poor-prognosis primary breast cancer correlate with survival

1 reference

12 December 2020

Identifiers

DOI

10.1186/1471-2164-5-38

1 reference

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Dimensions Publication ID

30 December 2019

1 reference

9 September 2019

https://scigraph.springernature.com/pub.10.1186/1471-2164-5-38

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:15222896%20AND%20SRC:MED&resulttype=core&format=json

30 December 2019

PubMed publication ID

15222896

1 reference