Some statistical properties of regulatory DNA sequences, and their use in predicting regulatory regions in the Drosophila genome: the fluffy-tail test (Q24804394)

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English	Some statistical properties of regulatory DNA sequences, and their use in predicting regulatory regions in the Drosophila genome: the fluffy-tail test	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

3 July 2017

Some statistical properties of regulatory DNA sequences, and their use in predicting regulatory regions in the Drosophila genome: the fluffy-tail test (English)

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Europe PubMed Central

PubMed publication ID

3 July 2017

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Klaudia Walter

3

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Irina Abnizova

1

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Europe PubMed Central

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3 July 2017

Rene te Boekhorst

2

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3 July 2017

Walter R Gilks

4

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3 July 2017

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publication date

27 April 2005

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3 July 2017

BMC Bioinformatics

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3 July 2017

6

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PubMed publication ID

3 July 2017

1

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109

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Europe PubMed Central

PubMed publication ID

3 July 2017

Statistical extraction of Drosophila cis-regulatory modules using exhaustive assessment of local word frequency

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1127108

7 April 2017

Computational detection of genomic cis-regulatory modules applied to body patterning in the early Drosophila embryo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1127108

7 April 2017

Exploiting transcription factor binding site clustering to identify cis-regulatory modules involved in pattern formation in the Drosophila genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1127108

7 April 2017

Genome-wide analysis of clustered Dorsal binding sites identifies putative target genes in the Drosophila embryo

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1127108

7 April 2017

A computational genomics approach to the identification of gene networks

1 reference

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7 April 2017

Complexity: an internet resource for analysis of DNA sequence complexity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1127108

28 September 2017

Homotypic regulatory clusters in Drosophila.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1127108

28 September 2017

Phylogenetic shadowing of primate sequences to find functional regions of the human genome

1 reference

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28 September 2017

Strategies and tools for whole-genome alignments

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1127108

28 September 2017

Distinguishing regulatory DNA from neutral sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1127108

28 September 2017

Long-range correlations between DNA bending sites: relation to the structure and dynamics of nucleosomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1127108

28 September 2017

Promoter prediction on a genomic scale--the Adh experience

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1127108

28 September 2017

Interpolated markov chains for eukaryotic promoter recognition.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1127108

28 September 2017

Cis-regulatory logic in the endo16 gene: switching from a specification to a differentiation mode of control.

1 reference

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30 May 2018

Genomic cis-regulatory logic: experimental and computational analysis of a sea urchin gene

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1127108

30 May 2018

Searching for regulatory elements in human noncoding sequences.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1127108

30 May 2018

Identification of functional clusters of transcription factor binding motifs in genome sequences: the MSCAN algorithm.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1127108

28 November 2018

Algorithms for phylogenetic footprinting

1 reference

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28 November 2018

Joint modeling of DNA sequence and physical properties to improve eukaryotic promoter recognition

1 reference

https://pubmed.ncbi.nlm.nih.gov/15857505

12 December 2020

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10.1186/1471-2105-6-109

1 reference

Europe PubMed Central

PubMed publication ID

3 July 2017

DBLP publication ID

journals/bmcbi/AbnizovaBWG05

1 reference

DBLP Dataset 2021-01-02

28 January 2021

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PMC publication ID

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PubMed publication ID

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Europe PubMed Central

PubMed publication ID

3 July 2017

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