A comprehensive transcript index of the human genome generated using microarrays and computational approaches (Q24809389)

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object named as

Eric E Schadt

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author name string

Stephen W Edwards

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Debraj GuhaThakurta

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Dan Holder

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Lisa Ying

5

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Vladimir Svetnik

6

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Amy Leonardson

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Kyle W Hart

8

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Archie Russell

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Guoya Li

10

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Guy Cavet

11

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John Castle

12

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Paul McDonagh

13

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Zhengyan Kan

14

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Ronghua Chen

15

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Mihai Margarint

17

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Ramon M Caceres

18

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Jason M Johnson

19

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Christopher D Armour

20

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Philip W Garrett-Engele

21

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Nicholas F Tsinoremas

22

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Daniel D Shoemaker

describes a project that uses

23

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language of work or name

English

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publication date

2004

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published in

Genome Biology

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volume

5

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issue

10

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page(s)

R73

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1 reference

A comprehensive transcript index of the human genome generated using microarrays and computational approaches

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Novel RNAs identified from an in-depth analysis of the transcriptome of human chromosomes 21 and 22

1 reference

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The Pfam protein families database

7 April 2017

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Optimization of oligonucleotide arrays and RNA amplification protocols for analysis of transcript structure and alternative splicing

7 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545593

The transcriptional activity of human Chromosome 22

7 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545593

Reevaluating human gene annotation: a second-generation analysis of chromosome 22

7 April 2017

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Transcriptome analysis of Escherichia coli using high-density oligonucleotide probe arrays

7 April 2017

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Modulation of TCR-induced transcriptional profiles by ligation of CD28, ICOS, and CTLA-4 receptors

7 April 2017

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7 April 2017

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A draft annotation and overview of the human genome

7 April 2017

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Initial sequencing and analysis of the human genome

7 April 2017

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

7 April 2017

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Spatial flexibility in ternary complexes between SRF and its accessory proteins

7 April 2017

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Complete sequencing and characterization of 21,243 full-length human cDNAs

7 April 2017

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Initial sequencing and comparative analysis of the mouse genome

7 April 2017

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The DNA sequence and comparative analysis of human chromosome 20

7 April 2017

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The Sequence of the Human Genome

7 April 2017

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Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection

7 April 2017

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Prediction of complete gene structures in human genomic DNA

7 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545593

Unbiased mapping of transcription factor binding sites along human chromosomes 21 and 22 points to widespread regulation of noncoding RNAs

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545593

Genome-wide survey of human alternative pre-mRNA splicing with exon junction microarrays

7 April 2017

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Empirical analysis of transcriptional activity in the Arabidopsis genome

7 April 2017

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The InterPro database, 2003 brings increased coverage and new features

7 April 2017

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Large-scale transcriptional activity in chromosomes 21 and 22

7 April 2017

1 reference

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Evaluation of gene-finding programs on mammalian sequences

7 April 2017

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The DNA sequence of human chromosome 22

7 April 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=545593

Initial assessment of human gene diversity and expression patterns based upon 83 million nucleotides of cDNA sequence

7 April 2017

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RefSeq and LocusLink: NCBI gene-centered resources

7 April 2017

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Genetics of gene expression surveyed in maize, mouse and man

7 April 2017

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Expression profiling using microarrays fabricated by an ink-jet oligonucleotide synthesizer

7 April 2017

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Ab initio gene finding in Drosophila genomic DNA

7 April 2017

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Signaling and circuitry of multiple MAPK pathways revealed by a matrix of global gene expression profiles

7 April 2017

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A computer program for aligning a cDNA sequence with a genomic DNA sequence

7 April 2017

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AVID: A global alignment program

7 April 2017

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An expanding universe of noncoding RNAs

28 September 2017

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rVista for comparative sequence-based discovery of functional transcription factor binding sites

28 September 2017

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Using the transcriptome to annotate the genome

28 September 2017

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The contribution of 700,000 ORF sequence tags to the definition of the human transcriptome.

28 September 2017

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Experimental annotation of the human genome using microarray technology

28 September 2017

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Analysis of expressed sequence tags indicates 35,000 human genes

28 September 2017

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d2_cluster: a validated method for clustering EST and full-length cDNAsequences

28 September 2017

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The mammalian gene collection

28 September 2017

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Identification of the human beta-actin enhancer and its binding factor

28 September 2017

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5' flanking and first intron sequences of the human beta-actin gene required for efficient promoter activity

28 September 2017

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Computational methods for the identification of genes in vertebrate genomic sequences.

28 September 2017

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Gene index analysis of the human genome estimates approximately 120,000 genes.

30 May 2018

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Automated gene identification in large-scale genomic sequences.

28 November 2018

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A Comparison of the Celera and Ensembl Predicted Gene Sets Reveals Little Overlap in Novel Genes

28 November 2018

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PubMed

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