The post-transcriptional gene silencing machinery functions independently of DNA methylation to repress a LINE1-like retrotransposon in Neurospora crassa (Q24803153)

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English	The post-transcriptional gene silencing machinery functions independently of DNA methylation to repress a LINE1-like retrotransposon in Neurospora crassa	scientific article

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scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

2 July 2017

The post-transcriptional gene silencing machinery functions independently of DNA methylation to repress a LINE1-like retrotransposon in Neurospora crassa (English)

1 reference

Europe PubMed Central

PubMed publication ID

2 July 2017

retrotransposon

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DNA methylation

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RecQ family helicase

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dicer-like protein 2

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RNA-dependent RNA polymerase

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dicer-like protein 1

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post-transcriptional silencing protein QDE-2

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post-transcriptional silencing protein QDE-2, variant 1

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Neurospora crassa

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based on heuristic

inferred from title

object named as

Tony Nolan

1

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author name string

Laura Braccini

2

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Europe PubMed Central

PubMed publication ID

2 July 2017

Gianluca Azzalin

3

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Europe PubMed Central

PubMed publication ID

2 July 2017

Arianna De Toni

4

1 reference

Europe PubMed Central

PubMed publication ID

2 July 2017

Giuseppe Macino

5

1 reference

Europe PubMed Central

PubMed publication ID

2 July 2017

Carlo Cogoni

6

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Europe PubMed Central

PubMed publication ID

2 July 2017

language of work or name

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publication date

14 March 2005

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Europe PubMed Central

PubMed publication ID

2 July 2017

Nucleic Acids Research

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Europe PubMed Central

PubMed publication ID

2 July 2017

33

1 reference

Europe PubMed Central

PubMed publication ID

2 July 2017

5

1 reference

Europe PubMed Central

PubMed publication ID

2 July 2017

1564-1573

1 reference

Europe PubMed Central

PubMed publication ID

2 July 2017

Genetic and functional diversification of small RNA pathways in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

RNAi-mediated targeting of heterochromatin by the RITS complex

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

Distinct mechanisms determine transposon inheritance and methylation via small interfering RNA and histone modification

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

The genome sequence of the filamentous fungus Neurospora crassa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

Role for a bidentate ribonuclease in the initiation step of RNA interference

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

The small RNA profile during Drosophila melanogaster development

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

RNA-mediated gene silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

Regulation of heterochromatic silencing and histone H3 lysine-9 methylation by RNAi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

dim-2 encodes a DNA methyltransferase responsible for all known cytosine methylation in Neurospora

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

Role of transposable elements in heterochromatin and epigenetic control

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

Distinct roles for Drosophila Dicer-1 and Dicer-2 in the siRNA/miRNA silencing pathways

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

ARGONAUTE4 control of locus-specific siRNA accumulation and DNA and histone methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

Endogenous and silencing-associated small RNAs in plants

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

Argonaute2, a link between genetic and biochemical analyses of RNAi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

The rde-1 gene, RNA interference, and transposon silencing in C. elegans

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

Transcription of IAP endogenous retroviruses is constrained by cytosine methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

Cytosine methylation and the ecology of intragenomic parasites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

7 April 2017

RNAi-dependent and RNAi-independent mechanisms contribute to the silencing of RIPed sequences in Neurospora crassa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 September 2017

Transcriptional disruption by the L1 retrotransposon and implications for mammalian transcriptomes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 September 2017

Redundancy of the two dicer genes in transgene-induced posttranscriptional gene silencing in Neurospora crassa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 September 2017

The methylated component of the Neurospora crassa genome

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 September 2017

RNA interference machinery regulates chromosome dynamics during mitosis and meiosis in fission yeast

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 September 2017

Involvement of small RNAs and role of the qde genes in the gene silencing pathway in Neurospora

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 September 2017

DNA methylation and epigenetic inheritance in plants and filamentous fungi

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 September 2017

Gene silencing as an adaptive defence against viruses

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 September 2017

Mobilization of transposons by a mutation abolishing full DNA methylation in Arabidopsis

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 September 2017

Mut-7 of C. elegans, required for transposon silencing and RNA interference, is a homolog of Werner syndrome helicase and RNaseD.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 September 2017

The Neurospora transposon Tad is sensitive to repeat-induced point mutation (RIP).

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 September 2017

DNA methylation associated with repeat-induced point mutation in Neurospora crassa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 September 2017

Cloning and characterization of the gene for beta-tubulin from a benomyl-resistant mutant of Neurospora crassa and its use as a dominant selectable marker

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 September 2017

Tad1-1, an active LINE-like element of Neurospora crassa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

30 May 2018

Restricted distribution of the Tad transposon in strains of Neurospora

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

30 May 2018

Tad, a LINE-like transposable element of Neurospora, can transpose between nuclei in heterokaryons

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

30 May 2018

A portable signal causing faithful DNA methylation de novo in Neurospora crassa.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

19 June 2018

DNA methylation is independent of RNA interference in Neurospora

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 November 2018

RNA silencing genes control de novo DNA methylation

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 November 2018

Hairpin RNAs and retrotransposon LTRs effect RNAi and chromatin-based gene silencing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 November 2018

The QDE-3 homologue RecQ-2 co-operates with QDE-3 in DNA repair in Neurospora crassa

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 November 2018

DNA methylation inhibits expression and transposition of the Neurospora Tad retrotransposon

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 November 2018

Transgene and transposon silencing in Chlamydomonas reinhardtii by a DEAH-box RNA helicase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 November 2018

Posttranscriptional gene silencing in Neurospora by a RecQ DNA helicase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 November 2018

Gene silencing in Neurospora crassa requires a protein homologous to RNA-dependent RNA polymerase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1065258

28 November 2018

Elimination of active tad elements during the sexual phase of the Neurospora crassa life cycle

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767281

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Meiotic silencing by unpaired DNA

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767281

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Transposon silencing in the Caenorhabditis elegans germ line by natural RNAi

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767281

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Efficient gene silencing by expression of double stranded RNA in Neurospora crassa

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767281

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Gene silencing in worms and fungi

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767281

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Abnormal chromosome behavior in Neurospora mutants defective in DNA methylation

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767281

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Tad, a Neurospora LINE-like retrotransposon exhibits a complex pattern of transcription

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767281

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Silencing of retrotransposons in arabidopsis and reactivation by the ddm1 mutation

1 reference

https://pubmed.ncbi.nlm.nih.gov/15767281

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1093/NAR/GKI300

1 reference

Europe PubMed Central

PubMed publication ID

2 July 2017

PMC publication ID

0 references

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

2 July 2017

ResearchGate publication ID

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