DNA isolation method is a source of global DNA methylation variability measured with LUMA. Experimental analysis and a systematic review (Q26829876)

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object named as

Joan Montaner

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author name string

Carolina Soriano-Tárraga

1

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Jordi Jiménez-Conde

2

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Eva Giralt-Steinhauer

3

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Ángel Ois

4

1 reference

Ana Rodríguez-Campello

5

1 reference

Elisa Cuadrado-Godia

6

1 reference

Israel Fernández-Cadenas

7

1 reference

Gavin Lucas

9

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Jaume Roquer

11

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language of work or name

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2013

1 reference

9 April 2013

7 references

2 August 2019

8 September 2019

12 October 2019

18 October 2019

3 September 2020

4 September 2020

25 September 2020

8 references

2 August 2019

8 September 2019

12 October 2019

18 October 2019

3 September 2020

4 September 2020

25 September 2020

8

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issue

4

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page(s)

e60750

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Creative Commons Attribution 4.0 International

copyright license

7 references

2 August 2019

8 September 2019

12 October 2019

18 October 2019

3 September 2020

4 September 2020

Distinct DNA methylomes of newborns and centenarians

25 September 2020

0 references

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Differential methylation of tissue- and cancer-specific CpG island shores distinguishes human induced pluripotent stem cells, embryonic stem cells and fibroblasts

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

The PRISMA statement for reporting systematic reviews and meta-analyses of studies that evaluate health care interventions: explanation and elaboration

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Intra-individual change over time in DNA methylation with familial clustering

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Epigenetic modifications and human disease

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Tackling the widespread and critical impact of batch effects in high-throughput data

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Delivery type not associated with global methylation at birth

9 May 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Genomic methylation changes over time in peripheral blood mononuclear cell DNA: differences by assay type and baseline values

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Influence of prenatal arsenic exposure and newborn sex on global methylation of cord blood DNA

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Adult global DNA methylation in relation to pre-natal nutrition.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Cancer epigenomics: beyond genomics

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

DNA methylation in peripheral blood measured by LUMA is associated with breast cancer in a population-based study

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

DNA methylation in white blood cells: association with risk factors in epidemiologic studies

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Comprehensive DNA methylation analysis of human peripheral blood leukocytes and lymphoblastoid cell lines

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Global methylation profiles in DNA from different blood cell types

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Predictors of global methylation levels in blood DNA of healthy subjects: a combined analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Epigenetics, oxidative stress, and Alzheimer disease

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Decline in genomic DNA methylation through aging in a cohort of elderly subjects

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Future impact of integrated high-throughput methylome analyses on human health and disease

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Epigenetic gene silencing in cancer: the DNA hypermethylome

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

DNA hypomethylation and human diseases.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Oxidative damage to methyl-CpG sequences inhibits the binding of the methyl-CpG binding domain (MBD) of methyl-CpG binding protein 2 (MeCP2).

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Epigenomics: beyond CpG islands.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Oxidative DNA damage: biological significance and methods of analysis

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Determination of 8-hydroxydeoxyguanosine in human cells under oxygen-free conditions.

28 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3621987

Epigenetics as a unifying principle in the aetiology of complex traits and diseases.

31 May 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0060750

LUMA (LUminometric Methylation Assay)--a high throughput method to the analysis of genomic DNA methylation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0060750

Early arterial study in the prediction of mortality after acute ischemic stroke

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0060750

Impact of inflammation on epigenetic DNA methylation - a novel risk factor for cardiovascular disease?

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0060750

7,8-Dihydro-8-oxo-2'-deoxyguanosine present in DNA is not simply an artefact of isolation.

21 January 2018

1 reference

https://api.crossref.org/works/10.1371%2FJOURNAL.PONE.0060750

Artificial background and induced levels of oxidative base damage in DNA from human cells

21 January 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/23585847

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Using LUMA: a Luminometric-based assay for global DNA-methylation

1 reference

https://pubmed.ncbi.nlm.nih.gov/23585847

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1371/JOURNAL.PONE.0060750

0 references

0 references

1 reference

PubMed publication ID

23585847

1 reference