Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot (Q27617509)

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English	Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot	scientific article

Statements

instance of

scholarly article

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title

Minor groove RNA triplex in the crystal structure of a ribosomal frameshifting viral pseudoknot (English)

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main subject

crystal structure

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author name string

L Su

series ordinal

1

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L Chen

series ordinal

2

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M Egli

series ordinal

3

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J M Berger

series ordinal

4

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A Rich

series ordinal

5

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publication date

March 1999

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published in

Nature structural biology

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volume

6

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issue

3

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page(s)

285-92

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cites work

The CCP4 suite: programs for protein crystallography

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Structure of the autoregulatory pseudoknot within the gene 32 messenger RNA of bacteriophages T2 and T6: a model for a possible family of structurally related RNA pseudoknots

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RNA pseudoknots. Stability and loop size requirements

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Stereoelectronic effects of deoxyribose O4' on DNA conformation

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A new principle of RNA folding based on pseudoknotting

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PubMed

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Identification and analysis of the pseudoknot-containing gag-pro ribosomal frameshift signal of simian retrovirus-1.

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Triple-strand formation in the homopurine:homopyrimidine DNA oligonucleotides d(G-A)4 and d(T-C)4

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Synthesis of small RNAs using T7 RNA polymerase

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reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

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Conformation of an RNA pseudoknot

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

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Analysis of the role of the pseudoknot component in the SRV-1 gag-pro ribosomal frameshift signal: loop lengths and stability of the stem regions

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https://pubmed.ncbi.nlm.nih.gov/10074948

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Signals for ribosomal frameshifting in the Rous sarcoma virus gag-pol region

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[27] Maximum-likelihood heavy-atom parameter refinement for multiple isomorphous replacement and multiwavelength anomalous diffraction methods.

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The chemical basis of adenosine conservation throughout the Tetrahymena ribozyme

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12 December 2020

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Folding of an mRNA pseudoknot required for stop codon readthrough: effects of mono- and divalent ions on stability

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Crystal structures of an A-form duplex with single-adenosine bulges and a conformational basis for site-specific RNA self-cleavage

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THE TAUTOMERIC FORM OF HELICAL POLYRIBOCYTIDYLIC ACID

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The crystal structure of an all-RNA hammerhead ribozyme: a proposed mechanism for RNA catalytic cleavage

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https://pubmed.ncbi.nlm.nih.gov/10074948

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutational analysis of the RNA pseudoknot involved in efficient ribosomal frameshifting in simian retrovirus-1

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/10074948

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural domains of transfer RNA molecules

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/10074948

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12 December 2020

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Model for an RNA tertiary interaction from the structure of an intermolecular complex between a GAAA tetraloop and an RNA helix.

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

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12 December 2020

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Processing of X-ray diffraction data collected in oscillation mode

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/10074948

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12 December 2020

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Crystal structure of a four-stranded intercalated DNA: d(C4)

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

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12 December 2020

based on heuristic

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The definition of generalized helicoidal parameters and of axis curvature for irregular nucleic acids

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutational analysis of the RNA pseudoknot component of a coronavirus ribosomal frameshifting signal

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Programmed translational frameshifting

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NMR structure of a classical pseudoknot: interplay of single- and double-stranded RNA

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Base-pairings within the RNA pseudoknot associated with the simian retrovirus-1 gag-pro frameshift site

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Recoding: dynamic reprogramming of translation.

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Three-dimensional structure of a hammerhead ribozyme

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A mutant RNA pseudoknot that promotes ribosomal frameshifting in mouse mammary tumor virus

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Structural and functional studies of retroviral RNA pseudoknots involved in ribosomal frameshifting: nucleotides at the junction of the two stems are important for efficient ribosomal frameshifting.

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Improved methods for building protein models in electron density maps and the location of errors in these models

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Crystal structure of a group I ribozyme domain: principles of RNA packing

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Translating old drugs into new treatments: ribosomal frameshifting as a target for antiviral agents

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

An RNA pseudoknot and an optimal heptameric shift site are required for highly efficient ribosomal frameshifting on a retroviral messenger RNA

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A tetrameric DNA structure with protonated cytosine.cytosine base pairs

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribosomal movement impeded at a pseudoknot required for frameshifting

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The structure of an RNA pseudoknot that causes efficient frameshifting in mouse mammary tumor virus

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribosomal frameshifting requires a pseudoknot in the Saccharomyces cerevisiae double-stranded RNA virus

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

HhaI methyltransferase flips its target base out of the DNA helix

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ribosomal pausing during translation of an RNA pseudoknot

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The structure of HIV-1 reverse transcriptase complexed with an RNA pseudoknot inhibitor

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/10074948

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1038/6722

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4497145

OpenCitations bibliographic resource ID

4497145

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4497145

PubMed publication ID

10074948

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

4497145

ResearchGate publication ID

13215842

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