Energy barriers and driving forces in tRNA translocation through the ribosome (Q27687431)

9

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Niels Fischer

Niels Fischer

5

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Lars V Bock

Lars V Bock

1

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Andrea C Vaiana

Andrea C Vaiana

8

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Gunnar F. Schröder

Gunnar F Schröder

3

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Marina Rodnina

Marina V Rodnina

7

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Holger Stark

6

Holger Stark

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author name string

Christian Blau

2

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Iakov I Davydov

Nature Structural & Molecular Biology

4

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publication date

December 2013

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published in

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volume

20

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issue

12

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page(s)

1390-6

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cites work

Locking and unlocking of ribosomal motions

1 reference

Structures of the ribosome in intermediate states of ratcheting

21 April 2017

1 reference

Structures of the bacterial ribosome in classical and hybrid states of tRNA binding

21 April 2017

1 reference

Structures of the bacterial ribosome at 3.5 A resolution

21 April 2017

1 reference

Hydrolysis of GTP by elongation factor G drives tRNA movement on the ribosome

21 April 2017

1 reference

An extensive network of information flow through the B1b/c intersubunit bridge of the yeast ribosome

21 April 2017

1 reference

Crystal structure of the ribosome at 5.5 A resolution

21 April 2017

1 reference

The Structure of the Ribosome with Elongation Factor G Trapped in the Posttranslocational State

21 April 2017

1 reference

Structure and Dynamics of the Mammalian Ribosomal Pretranslocation Complex

21 April 2017

1 reference

Solution structure of tRNAVal from refinement of homology model against residual dipolar coupling and SAXS data

21 April 2017

1 reference

GROMACS 4: Algorithms for Highly Efficient, Load-Balanced, and Scalable Molecular Simulation

21 April 2017

1 reference

Comparison of multiple Amber force fields and development of improved protein backbone parameters

21 April 2017

1 reference

A ratchet-like inter-subunit reorganization of the ribosome during translocation

21 April 2017

1 reference

Intermediate states in the movement of transfer RNA in the ribosome

21 April 2017

1 reference

Dynamic reorganization of the functionally active ribosome explored by normal mode analysis and cryo-electron microscopy

21 January 2018

1 reference

Spontaneous reverse movement of mRNA-bound tRNA through the ribosome.

21 January 2018

1 reference

Reverse translocation of tRNA in the ribosome.

21 January 2018

1 reference

Translocation of tRNA during protein synthesis

21 January 2018

1 reference

Contribution of intersubunit bridges to the energy barrier of ribosomal translocation

21 January 2018

1 reference

Ribosome dynamics and tRNA movement by time-resolved electron cryomicroscopy

21 January 2018

1 reference

Visualization of the hybrid state of tRNA binding promoted by spontaneous ratcheting of the ribosome

21 January 2018

1 reference

Structure of ratcheted ribosomes with tRNAs in hybrid states

21 January 2018

1 reference

Identification of two distinct hybrid state intermediates on the ribosome

21 January 2018

1 reference

Following movement of the L1 stalk between three functional states in single ribosomes.

21 January 2018

1 reference

The role of L1 stalk-tRNA interaction in the ribosome elongation cycle

21 January 2018

1 reference

Simulating movement of tRNA into the ribosome during decoding

21 January 2018

1 reference

Examinations of tRNA Range of Motion Using Simulations of Cryo-EM Microscopy and X-Ray Data

21 January 2018

1 reference

Flexible multi-scale fitting of atomic structures into low-resolution electron density maps with elastic network normal mode analysis.

21 January 2018

1 reference

An all-atom structure-based potential for proteins: bridging minimal models with all-atom empirical forcefields

21 January 2018

1 reference

YUP.SCX: coaxing atomic models into medium resolution electron density maps

21 January 2018

1 reference

Combining efficient conformational sampling with a deformable elastic network model facilitates structure refinement at low resolution

21 January 2018

1 reference

Consensus among multiple approaches as a reliability measure for flexible fitting into cryo-EM data

21 January 2018

1 reference

Flexible fitting of high-resolution x-ray structures into cryoelectron microscopy maps using biased molecular dynamics simulations

21 January 2018

1 reference

The structure of the aquaporin-1 water channel: a comparison between cryo-electron microscopy and X-ray crystallography

21 January 2018

1 reference

Spontaneous intersubunit rotation in single ribosomes.

21 January 2018

1 reference

Kinetically competent intermediates in the translocation step of protein synthesis

21 January 2018

1 reference

Transfer RNA-mediated regulation of ribosome dynamics during protein synthesis

21 January 2018

1 reference

Navigating the ribosome's metastable energy landscape

21 January 2018

1 reference

Single-molecule fluorescence measurements of ribosomal translocation dynamics.

21 January 2018

1 reference

tRNA dynamics on the ribosome during translation

21 January 2018

1 reference

Rapid ribosomal translocation depends on the conserved 18-55 base pair in P-site transfer RNA.

21 January 2018

1 reference

A flexible loop in yeast ribosomal protein L11 coordinates P-site tRNA binding

21 January 2018

1 reference

The Energy Landscapes and Motions of Proteins

21 January 2018

1 reference

Coupling of ribosomal L1 stalk and tRNA dynamics during translation elongation

21 January 2018

1 reference

Functional studies on ribosomes lacking protein L1 from mutant Escherichia coli

31 March 2020

1 reference

Energetics of the Ribosome

31 March 2020

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/24186064