Clustering of yeast tRNA genes is mediated by specific association of condensin with tRNA gene transcription complexes. (Q27932659)

PubMed publication ID

18708579

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18708579%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

title

Clustering of yeast tRNA genes is mediated by specific association of condensin with tRNA gene transcription complexes (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18708579%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

1 reference

Gene Ontology release 2020-05-02

Gene Ontology ID

GO:0070058

Condensin subunit SMC2 YFR031C

1 reference

Condensin subunit BRN1 YBL097W

1 reference

Condensin subunit YCS4 YLR272C

1 reference

Condensin subunit SMC4 YLR086W

1 reference

Condensin subunit YCG1 YDR325W

1 reference

author

Rebecca A. Haeusler

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18708579%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

Matthew Pratt-hyatt

2

1 reference

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12 January 2020

author name string

Paul D Good

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18708579%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

Theresa A Gipson

4

1 reference

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12 January 2020

David R Engelke

5

1 reference

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12 January 2020

language of work or name

English

0 references

publication date

1 August 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18708579%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

2 references

PubMed publication ID

18708579

1 December 2016

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18708579%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

volume

22

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18708579%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

issue

16

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18708579%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

page(s)

2204-2214

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18708579%20AND%20SRC:MED&resulttype=core&format=json

Identification of cis-acting sites for condensin loading onto budding yeast chromosomes

12 January 2020

cites work

1 reference

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Condensin binding at distinct and specific chromosomal sites in the Saccharomyces cerevisiae genome

20 March 2017

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Rings, bracelet or snaps: fashionable alternatives for Smc complexes

20 March 2017

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Interchromosomal associations between alternatively expressed loci

20 March 2017

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Gene recruitment of the activated INO1 locus to the nuclear membrane

20 March 2017

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Global analysis of protein expression in yeast

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20 March 2017

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Nuclear architecture and spatial positioning help establish transcriptional states of telomeres in yeast.

20 March 2017

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20 March 2017

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20 March 2017

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The condensin complex governs chromosome condensation and mitotic transmission of rDNA.

20 March 2017

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20 March 2017

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Transcription factor IIIB generates extended DNA interactions in RNA polymerase III transcription complexes on tRNA genes

20 March 2017

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20 March 2017

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20 March 2017

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The structure and function of SMC and kleisin complexes

20 March 2017

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Dynamic molecular linkers of the genome: the first decade of SMC proteins

20 March 2017

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Genome-wide localization of the nuclear transport machinery couples transcriptional status and nuclear organization

20 March 2017

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Functions of microtubules in the Saccharomyces cerevisiae cell cycle

20 March 2017

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Diversity of tRNA genes in eukaryotes

7 April 2017

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29 September 2017

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Distinct nuclear arrangement of active and inactive c-myc genes in control and differentiated colon carcinoma cells

29 September 2017

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Protein kinase A regulates RNA polymerase III transcription through the nuclear localization of Maf1

29 September 2017

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Spatial organization of transcription by RNA polymerase III.

29 September 2017

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Chromosome organization and segregation in bacteria

29 September 2017

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Increased recombination between active tRNA genes

29 September 2017

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Nuclear architecture in the light of gene expression and cell differentiation studies

29 September 2017

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Chromosome territories--a functional nuclear landscape.

29 September 2017

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Long-range directional movement of an interphase chromosome site

29 September 2017

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Identification of cis-regulatory elements for MECP2 expression

29 September 2017

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Coregulated human globin genes are frequently in spatial proximity when active

29 September 2017

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The genome and the nucleus: a marriage made by evolution. Genome organisation and nuclear architecture

29 September 2017

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Developmentally induced changes in transcriptional program alter spatial organization across chromosomes

29 September 2017

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29 September 2017

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Long-range interactions between three transcriptional enhancers, active Vkappa gene promoters, and a 3' boundary sequence spanning 46 kilobases

29 September 2017

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Spindle-independent condensation-mediated segregation of yeast ribosomal DNA in late anaphase.

29 September 2017

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Silencing near tRNA genes requires nucleolar localization.

29 September 2017

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The function of nuclear architecture: a genetic approach

29 September 2017

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Long-range compaction and flexibility of interphase chromatin in budding yeast analyzed by high-resolution imaging techniques.

29 September 2017

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Spatial positioning; a new dimension in genome function

29 September 2017

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Multiple roles of Condensins: a complex story.

29 September 2017

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The evolutionary dynamics of eukaryotic gene order

29 September 2017

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Spatial genome organization

29 September 2017

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A Minimal RNA Polymerase III Transcription System from Human Cells Reveals Positive and Negative Regulatory Roles for CK2

29 September 2017

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Condensin and cohesin: more than chromosome compactor and glue

29 September 2017

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29 September 2017

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29 September 2017

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29 September 2017

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From snapshots to moving pictures: new perspectives on nuclear organization.

29 September 2017

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The positioning and dynamics of origins of replication in the budding yeast nucleus.

29 September 2017

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A CBF5 mutation that disrupts nucleolar localization of early tRNA biosynthesis in yeast also suppresses tRNA gene-mediated transcriptional silencing.

29 September 2017

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Large-scale chromatin organization of the major histocompatibility complex and other regions of human chromosome 6 and its response to interferon in interphase nuclei

29 September 2017

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Mitotic chromosome condensation requires Brn1p, the yeast homologue of Barren

29 September 2017

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Survey and summary: transcription by RNA polymerases I and III.

29 September 2017

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Dynamic repositioning of genes in the nucleus of lymphocytes preparing for cell division

29 September 2017

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Nucleolar localization of early tRNA processing

29 September 2017

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The dynamic nuclear redistribution of an hnRNP K-homologous protein during Drosophila embryo development and heat shock. Flexibility of transcription sites in vivo

29 September 2017

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The topographic organization of repetitive DNA in the human nucleolus

29 September 2017

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tRNA genes as transcriptional repressor elements

29 September 2017

1 reference

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Chromosome condensation and sister chromatid pairing in budding yeast

29 September 2017

1 reference

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The nucleolar architecture of polymerase I transcription and processing.

29 September 2017

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Genomic footprinting of a yeast tRNA gene reveals stable complexes over the 5'-flanking region

29 September 2017

1 reference

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Two components of Saccharomyces cerevisiae transcription factor IIIB (TFIIIB) are stereospecifically located upstream of a tRNA gene and interact with the second-largest subunit of TFIIIC.

29 September 2017

1 reference

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Adjacent pol II and pol III promoters: transcription of the yeast retrotransposon Ty3 and a target tRNA gene

29 September 2017

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29 September 2017

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29 September 2017

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Interphase chromosomes undergo constrained diffusional motion in living cells

2 June 2018

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Spatial consequences of defective processing of specific yeast mRNAs revealed by fluorescent in situ hybridization

2 June 2018

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Distant HNF1 site as a master control for the human class I alcohol dehydrogenase gene expression.

2 June 2018

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Nup-PI: the nucleopore-promoter interaction of genes in yeast

27 November 2018

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The Saccharomyces cerevisiae Smc2/4 condensin compacts DNA into (+) chiral structures without net supercoiling

27 November 2018

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Condensin regulates rDNA silencing by modulating nucleolar Sir2p

27 November 2018

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Live imaging of telomeres: yKu and Sir proteins define redundant telomere-anchoring pathways in yeast

27 November 2018

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12 December 2020

Nuclear oscillations and nuclear filament formation accompany single-strand annealing repair of a dicentric chromosome in Saccharomyces cerevisiae

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12 December 2020

An uncertainty principle in chromosome positioning

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12 December 2020

Behaviour of nucleolus organizing regions (NORs) and nucleoli during mitotic and meiotic divisions in budding yeast

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12 December 2020

Evidence for silencing compartments within the yeast nucleus: a role for telomere proximity and Sir protein concentration in silencer-mediated repression

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12 December 2020

Identifiers

DOI

10.1101/GAD.1675908

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18708579%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:18708579%20AND%20SRC:MED&resulttype=core&format=json

12 January 2020

PubMed publication ID

18708579

2 references