Genome wide expression analysis of the CCR4-NOT complex indicates that it consists of three modules with the NOT module controlling SAGA-responsive genes (Q27932886)

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English	Genome wide expression analysis of the CCR4-NOT complex indicates that it consists of three modules with the NOT module controlling SAGA-responsive genes	scientific article

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scholarly article

1 reference

PubMed publication ID

1 December 2016

Genome wide expression analysis of the CCR4-NOT complex indicates that it consists of three modules with the NOT module controlling SAGA-responsive genes (English)

1 reference

PubMed publication ID

1 December 2016

CCR4-NOT core subunit BTT1 YDR252W

1 reference

GOA release 2020-03-11

author name string

Yajun Cui

1

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Deepti B Ramnarain

2

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Yueh-Chin Chiang

3

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Liang-Hao Ding

4

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Jeffrey S McMahon

5

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Clyde L Denis

6

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language of work or name

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publication date

April 2008

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Molecular Genetics and Genomics

1 reference

PubMed publication ID

1 December 2016

279

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4

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323-37

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The CCR4 and CAF1 proteins of the CCR4-NOT complex are physically and functionally separated from NOT2, NOT4, and NOT5.

1 reference

https://api.crossref.org/works/10.1007%2FS00438-007-0314-1

21 January 2018

The NOT, SPT3, and MOT1 genes functionally interact to regulate transcription at core promoters

1 reference

https://api.crossref.org/works/10.1007%2FS00438-007-0314-1

21 January 2018

Identification of a mouse protein whose homolog in Saccharomyces cerevisiae is a component of the CCR4 transcriptional regulatory complex

1 reference

https://api.crossref.org/works/10.1007%2FS00438-007-0314-1

21 January 2018

Genomic expression programs in the response of yeast cells to environmental changes

1 reference

https://api.crossref.org/works/10.1007%2FS00438-007-0314-1

21 January 2018

The effects of dNTP pool imbalances on frameshift fidelity during DNA replication

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Ccr4-not complex and yTAF1 (yTaf(II)130p/yTaf(II)145p) show physical and functional interactions

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The NOT proteins are part of the CCR4 transcriptional complex and affect gene expression both positively and negatively

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The transcription factor associated Ccr4 and Caf1 proteins are components of the major cytoplasmic mRNA deadenylase in Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A comprehensive two-hybrid analysis to explore the yeast protein interactome

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Yeast BTF3 protein is encoded by duplicated genes and inhibits the expression of some genes in vivo.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification and distinct regulation of yeast TATA box-containing genes

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Open source clustering software

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The yeast Ccr4-Not complex controls ubiquitination of the nascent-associated polypeptide (NAC-EGD) complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A dynamic transcriptional network communicates growth potential to ribosome synthesis and critical cell size

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The CCR4 gene from Saccharomyces cerevisiae is required for both nonfermentative and spt-mediated gene expression

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Functional interaction of CCR4-NOT proteins with TATAA-binding protein (TBP) and its associated factors in yeast.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Characterization of Mutations in NOT2 Indicates that it Plays an Important Role in Maintaining the Integrity of the CCR4–NOT Complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Association of distinct yeast Not2 functional domains with components of Gcn5 histone acetylase and Ccr4 transcriptional regulatory complexes

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Saccharomyces cerevisiae Ccr4-not complex contributes to the control of Msn2p-dependent transcription by the Ras/cAMP pathway

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A genome-wide housekeeping role for TFIID and a highly regulated stress-related role for SAGA in Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Java Treeview--extensible visualization of microarray data

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CCR4, a 3'-5' poly(A) RNA and ssDNA exonuclease, is the catalytic component of the cytoplasmic deadenylase

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of new genes involved in the regulation of yeast alcohol dehydrogenase II.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Survival of DNA damage in yeast directly depends on increased dNTP levels allowed by relaxed feedback inhibition of ribonucleotide reductase

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ccr4-not complex mRNA deadenylase activity contributes to DNA damage responses in Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Global response of Saccharomyces cerevisiae to an alkylating agent

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Proteomics of the eukaryotic transcription machinery: identification of proteins associated with components of yeast TFIID by multidimensional mass spectrometry

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The CCR4-NOT complex plays diverse roles in mRNA metabolism

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CCR4/NOT complex associates with the proteasome and regulates histone methylation

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

DBF2, a cell cycle-regulated protein kinase, is physically and functionally associated with the CCR4 transcriptional regulatory complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The eukaryotic Ccr4-not complex: a regulatory platform integrating mRNA metabolism with cellular signaling pathways?

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ddb1 controls genome stability and meiosis in fission yeast

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification of a ubiquitin-protein ligase subunit within the CCR4-NOT transcription repressor complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genome-wide analysis of mRNA stability using transcription inhibitors and microarrays reveals posttranscriptional control of ribosome biogenesis factors

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Suppression of a new allele of the yeast RAD52 gene by overexpression of RAD51, mutations in srs2 and ccr4, or mating-type heterozygosity

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Regulation of histone H3K4 tri-methylation and PAF complex recruitment by the Ccr4-Not complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Purification and characterization of the 1.0 MDa CCR4-NOT complex identifies two novel components of the complex

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Interaction between Not1p, a component of the Ccr4-not complex, a global regulator of transcription, and Dhh1p, a putative RNA helicase

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Previously uncharacterized genes in the UV- and MMS-induced DNA damage response in yeast

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Ccr4p is the catalytic subunit of a Ccr4p/Pop2p/Notp mRNA deadenylase complex in Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Genetic evidence supports a role for the yeast CCR4-NOT complex in transcriptional elongation.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Systematic identification of pathways that couple cell growth and division in yeast

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Evidence for a nuclear passage of nascent polypeptide-associated complex subunits in yeast.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Dbf2 and Dbf20 protein kinases of budding yeast are activated after the metaphase to anaphase cell cycle transition

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular analysis of POP2 gene, a gene required for glucose-derepression of gene expression in Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Modulation of Ubc4p/Ubc5p-mediated stress responses by the RING-finger-dependent ubiquitin-protein ligase Not4p in Saccharomyces cerevisiae

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The TATA-binding protein-associated factor yTafII19p functionally interacts with components of the global transcriptional regulator Ccr4-Not complex and physically interacts with the Not5 subunit

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The yeast POP2 gene encodes a nuclease involved in mRNA deadenylation

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CDC39, an essential nuclear protein that negatively regulates transcription and differentially affects the constitutive and inducible HIS3 promoters

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mouse CAF1 can function as a processive deadenylase/3'-5'-exonuclease in vitro but in yeast the deadenylase function of CAF1 is not required for mRNA poly(A) removal

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

CAF1 plays an important role in mRNA deadenylation separate from its contact to CCR4.

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

NOT1(CDC39), NOT2(CDC36), NOT3, and NOT4 encode a global-negative regulator of transcription that differentially affects TATA-element utilization

1 reference

https://pubmed.ncbi.nlm.nih.gov/18214544

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1007/S00438-007-0314-1

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PubMed publication ID

1 reference

PubMed publication ID

1 December 2016

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