Multiple snoRNA gene clusters from Arabidopsis (Q28344647)

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5 December 2019

title

Multiple snoRNA gene clusters from Arabidopsis (English)

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5 December 2019

author name string

Brown JW

1

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5 December 2019

Clark GP

2

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5 December 2019

Leader DJ

3

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5 December 2019

Simpson CG

4

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5 December 2019

Lowe T

5

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5 December 2019

language of work or name

English

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publication date

1 December 2001

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5 December 2019

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5 December 2019

volume

7

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5 December 2019

issue

12

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5 December 2019

page(s)

1817-1832

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Identification of 10 novel snoRNA gene clusters from Arabidopsis thaliana

5 December 2019

cites work

1 reference

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Fibrillarin genes encode both a conserved nucleolar protein and a novel small nucleolar RNA involved in ribosomal RNA methylation in Arabidopsis thaliana

20 March 2017

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Homologs of small nucleolar RNAs in Archaea

20 March 2017

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Fibrillarin-associated box C/D small nucleolar RNAs in Trypanosoma brucei. Sequence conservation and implications for 2'-O-ribose methylation of rRNA

20 March 2017

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Archaeal homologs of eukaryotic methylation guide small nucleolar RNAs: lessons from the Pyrococcus genomes

20 March 2017

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Ribosome synthesis in Saccharomyces cerevisiae

20 March 2017

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Genome evolution in polyploids

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Selfish operons: the evolutionary impact of gene clustering in prokaryotes and eukaryotes

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20 March 2017

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A computational screen for methylation guide snoRNAs in yeast

20 March 2017

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Classification of gas5 as a multi-small-nucleolar-RNA (snoRNA) host gene and a member of the 5'-terminal oligopyrimidine gene family reveals common features of snoRNA host genes

20 March 2017

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Intronic snoRNA biosynthesis in Saccharomyces cerevisiae depends on the lariat-debranching enzyme: intron length effects and activity of a precursor snoRNA

20 March 2017

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Human U19 intron-encoded snoRNA is processed from a long primary transcript that possesses little potential for protein coding

20 March 2017

1 reference

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Processing of the precursors to small nucleolar RNAs and rRNAs requires common components

20 March 2017

1 reference

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Sequence and structural elements of methylation guide snoRNAs essential for site-specific ribose methylation of pre-rRNA.

20 March 2017

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Site-specific pseudouridine formation in preribosomal RNA is guided by small nucleolar RNAs

20 March 2017

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Targeted ribose methylation of RNA in vivo directed by tailored antisense RNA guides

20 March 2017

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Site-specific ribose methylation of preribosomal RNA: a novel function for small nucleolar RNAs

20 March 2017

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A mammalian gene with introns instead of exons generating stable RNA products

20 March 2017

1 reference

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The numerous modified nucleotides in eukaryotic ribosomal RNA

20 March 2017

1 reference

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Comparing sequenced segments of the tomato and Arabidopsis genomes: large-scale duplication followed by selective gene loss creates a network of synteny

20 March 2017

1 reference

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Processing of a dicistronic small nucleolar RNA precursor by the RNA endonuclease Rnt1.

20 March 2017

1 reference

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SnoRNA-guided ribose methylation of rRNA: structural features of the guide RNA duplex influencing the extent of the reaction

20 March 2017

1 reference

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The RNA world of the nucleolus: two major families of small RNAs defined by different box elements with related functions

20 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370220

7 April 2017

The small nucleolar RNAs

1 reference

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The probability of duplicate gene preservation by subfunctionalization

7 April 2017

1 reference

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Small nucleolar RNAs direct site-specific synthesis of pseudouridine in ribosomal RNA

7 April 2017

1 reference

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Role of the ITS2-proximal stem and evidence for indirect recognition of processing sites in pre-rRNA processing in yeast

7 April 2017

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Non-coding snoRNA host genes in Drosophila: expression strategies for modification guide snoRNAs

29 September 2017

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Novel features of the XRN-family in Arabidopsis: evidence that AtXRN4, one of several orthologs of nuclear Xrn2p/Rat1p, functions in the cytoplasm

29 September 2017

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The genes for small nucleolar RNAs in Trypanosoma brucei are organized in clusters and are transcribed as a polycistronic RNA.

29 September 2017

1 reference

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Guided tours: from precursor snoRNA to functional snoRNP.

29 September 2017

1 reference

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Evolutionarily conserved structural features in the ITS2 of mammalian pre-rRNAs and potential interactions with the snoRNA U8 detected by comparative analysis of new mouse sequences

29 September 2017

1 reference

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Seven novel methylation guide small nucleolar RNAs are processed from a common polycistronic transcript by Rat1p and RNase III in yeast.

29 September 2017

1 reference

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Elements essential for accumulation and function of small nucleolar RNAs directing site-specific pseudouridylation of ribosomal RNAs

29 September 2017

1 reference

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The structure of the ITS2-proximal stem is required for pre-rRNA processing in yeast

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370220

A comprehensive database for the small nucleolar RNAs from Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370220

Yeast RNase III as a key processing enzyme in small nucleolar RNAs metabolism.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370220

The host gene for intronic U17 small nucleolar RNAs in mammals has no protein-coding potential and is a member of the 5'-terminal oligopyrimidine gene family

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370220

Processing of the intron-encoded U18 small nucleolar RNA in the yeast Saccharomyces cerevisiae relies on both exo- and endonucleolytic activities

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370220

The organization of ribosomal RNA processing correlates with the distribution of nucleolar snRNAs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370220

Processing of the intron-encoded U16 and U18 snoRNAs: the conserved C and D boxes control both the processing reaction and the stability of the mature snoRNA

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370220

Elements essential for processing intronic U14 snoRNA are located at the termini of the mature snoRNA sequence and include conserved nucleotide boxes C and D.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370220

Processing of eukaryotic ribosomal RNA.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1370220

Molecular characterisation of plant U14 small nucleolar RNA genes: closely linked genes are transcribed as polycistronic U14 transcripts

29 September 2017

1 reference

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Classical and novel approaches to the detection and localization of the numerous modified nucleotides in eukaryotic ribosomal RNA

29 September 2017

1 reference

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Localization and processing from a polycistronic precursor of novel snoRNAs in maize

29 September 2017

1 reference

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Clusters of multiple different small nucleolar RNA genes in plants are expressed as and processed from polycistronic pre-snoRNAs

2 June 2018

1 reference

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Guiding ribose methylation of rRNA.

2 June 2018

1 reference

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Processing of fibrillarin-associated snoRNAs from pre-mRNA introns: an exonucleolytic process exclusively directed by the common stem-box terminal structure

2 June 2018

1 reference

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The origins of genomic duplications in Arabidopsis.

2 June 2018

1 reference

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Extensive duplication and reshuffling in the Arabidopsis genome

27 November 2018

1 reference

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Coiled body numbers in the Arabidopsis root epidermis are regulated by cell type, developmental stage and cell cycle parameters.

27 November 2018

1 reference

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Processing of vertebrate box C/D small nucleolar RNAs in plant cells

27 November 2018

1 reference

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Wheat-embryo ribonucleates. III. Modified nucleotide constituents in each of the 5.8S, 18S and 26S ribonucleates

27 November 2018

1 reference

12 December 2020

Analysis of pre-mRNA processing in transfected plant protoplasts

1 reference

12 December 2020

The organization of spliceosomal components in the nuclei of higher plants

1 reference

12 December 2020

Exonucleolytic processing of small nucleolar RNAs from pre-mRNA introns

1 reference

12 December 2020

Splicing-independent processing of plant box C/D and box H/ACA small nucleolar RNAs

1 reference

12 December 2020

Identifiers

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:11780637%20AND%20SRC:MED&resulttype=core&format=json

5 December 2019

PubMed publication ID

11780637

1 reference