Capturing heterogeneity in gene expression studies by surrogate variable analysis (Q28469315)

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Language	Label	Description	Also known as
English	Capturing heterogeneity in gene expression studies by surrogate variable analysis	scientific article

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scholarly article

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Europe PubMed Central

PMC publication ID

1994707

retrieved

17 April 2018

reference URL

http://europepmc.org/abstract/PMC/1994707

title

Capturing heterogeneity in gene expression studies by surrogate variable analysis (English)

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stated in

Europe PubMed Central

PMC publication ID

1994707

retrieved

17 April 2018

reference URL

http://europepmc.org/abstract/PMC/1994707

main subject

heterogeneity

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based on heuristic

inferred from title

author

Jeffrey T. Leek

series ordinal

1

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stated in

Europe PubMed Central

PMC publication ID

1994707

retrieved

17 April 2018

reference URL

http://europepmc.org/abstract/PMC/1994707

John D. Storey

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John D Storey

series ordinal

2

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language of work or name

English

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publication date

1 August 2007

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Europe PubMed Central

PMC publication ID

1994707

retrieved

17 April 2018

reference URL

http://europepmc.org/abstract/PMC/1994707

published in

PLOS Genetics

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Europe PubMed Central

PMC publication ID

1994707

retrieved

17 April 2018

reference URL

http://europepmc.org/abstract/PMC/1994707

volume

3

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stated in

Europe PubMed Central

PMC publication ID

1994707

retrieved

17 April 2018

reference URL

http://europepmc.org/abstract/PMC/1994707

issue

9

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stated in

Europe PubMed Central

PMC publication ID

1994707

retrieved

17 April 2018

reference URL

http://europepmc.org/abstract/PMC/1994707

page(s)

1724-1735

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stated in

Europe PubMed Central

PMC publication ID

1994707

retrieved

17 April 2018

reference URL

http://europepmc.org/abstract/PMC/1994707

copyright license

Creative Commons Attribution 4.0 International

start time

28 September 2007

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April 2022 Public Data File from Crossref

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copyrighted

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cites work

Principal components analysis corrects for stratification in genome-wide association studies

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

19 March 2017

Assessing stability of gene selection in microarray data analysis

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

19 March 2017

Multiple locus linkage analysis of genomewide expression in yeast

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

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A transcriptional profile of aging in the human kidney

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

19 March 2017

Statistical significance for genomewide studies

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

19 March 2017

Normalization for cDNA microarray data: a robust composite method addressing single and multiple slide systematic variation

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

19 March 2017

Genomic expression programs in the response of yeast cells to environmental changes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

19 March 2017

Cluster analysis and display of genome-wide expression patterns

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

19 March 2017

Exploring the metabolic and genetic control of gene expression on a genomic scale

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

19 March 2017

Significance analysis of time course microarray experiments

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

19 March 2017

The Connectivity Map: using gene-expression signatures to connect small molecules, genes, and disease

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

7 April 2017

Genetic analysis of genome-wide variation in human gene expression

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

7 April 2017

Genetics of gene expression surveyed in maize, mouse and man

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

7 April 2017

Genetic dissection of transcriptional regulation in budding yeast

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

7 April 2017

Analysis of variance for gene expression microarray data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

7 April 2017

Singular value decomposition for genome-wide expression data processing and modeling

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

7 April 2017

A new approach to intensity-dependent normalization of two-channel microarrays

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

29 September 2017

Genetic interactions between polymorphisms that affect gene expression in yeast

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

29 September 2017

Integrative analysis of the cancer transcriptome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

29 September 2017

Molecular classification of familial non-BRCA1/BRCA2 breast cancer

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

29 September 2017

Issues in cDNA microarray analysis: quality filtering, channel normalization, models of variations and assessment of gene effects

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

29 September 2017

Fundamental patterns underlying gene expression profiles: simplicity from complexity

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

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1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

29 September 2017

Remarks on Parallel Analysis.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

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1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

27 November 2018

Estimation of false discovery proportion under general dependence

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

27 November 2018

A reanalysis of a published Affymetrix GeneChip control dataset

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

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Gene-Expression Profiles in Hereditary Breast Cancer

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1994707

retrieved

27 November 2018

Correlation between gene expression levels and limitations of the empirical bayes methodology for finding differentially expressed genes

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17907809

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Trans-acting regulatory variation in Saccharomyces cerevisiae and the role of transcription factors

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17907809

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Experimental design for gene expression microarrays

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17907809

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Treating expression levels of different genes as a sample in microarray data analysis: is it worth a risk?

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17907809

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Molecular heterogeneity of inflammatory breast cancer: a hyperproliferative phenotype

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stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17907809

retrieved

12 December 2020

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Identifiers

DOI

10.1371/JOURNAL.PGEN.0030161

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Europe PubMed Central

PMC publication ID

1994707

retrieved

17 April 2018

reference URL

http://europepmc.org/abstract/PMC/1994707

OpenCitations bibliographic resource ID

181047

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Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

181047

PMC publication ID

1994707

1 reference

stated in

Europe PubMed Central

PMC publication ID

1994707

retrieved

17 April 2018

reference URL

http://europepmc.org/abstract/PMC/1994707

PubMed publication ID

17907809

1 reference

stated in

Europe PubMed Central

PMC publication ID

1994707

retrieved

17 April 2018

reference URL

http://europepmc.org/abstract/PMC/1994707

ResearchGate publication ID

5936851

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