Rapid activity-induced transcription of Arc and other IEGs relies on poised RNA polymerase II (Q28576463)

31 January 2017

title

Rapid activity-induced transcription of Arc and other IEGs relies on poised RNA polymerase II (English)

1 reference

31 January 2017

10

Serena M. Dudek

1 reference

31 January 2017

2

Erin M. Wissink

1 reference

31 January 2017

5

David C. Fargo

1 reference

31 January 2017

Ramendra N. Saha

1

1 reference

31 January 2017

Emma R. Bailey

3

1 reference

31 January 2017

Meilan Zhao

4

1 reference

31 January 2017

Ji-Yeon Hwang

6

1 reference

31 January 2017

Kelly R. Daigle

7

1 reference

31 January 2017

J. Daniel Fenn

8

1 reference

31 January 2017

Karen Adelman

9

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31 January 2017

language of work or name

English

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publication date

29 May 2011

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31 January 2017

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31 January 2017

volume

14

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31 January 2017

issue

7

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31 January 2017

page(s)

848–856

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Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

31 January 2017

cites work

1 reference

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17 March 2017

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RNA polymerase stalling at developmental control genes in the Drosophila melanogaster embryo

17 March 2017

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The EJC factor eIF4AIII modulates synaptic strength and neuronal protein expression

17 March 2017

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Controlling the elongation phase of transcription with P-TEFb

17 March 2017

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Human transcription elongation factor NELF: identification of novel subunits and reconstitution of the functionally active complex

17 March 2017

1 reference

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Evidence that negative elongation factor represses transcription elongation through binding to a DRB sensitivity-inducing factor/RNA polymerase II complex and RNA.

17 March 2017

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Influence of actinomycin D, a RNA synthesis inhibitor, on long-term potentiation in rat hippocampal neurons in vivo and in vitro

17 March 2017

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Arc, a growth factor and activity-regulated gene, encodes a novel cytoskeleton-associated protein that is enriched in neuronal dendrites

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Widespread transcription at neuronal activity-regulated enhancers

17 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

RNA polymerase is poised for activation across the genome

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Phosphorylation and functions of the RNA polymerase II CTD

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Transcriptional activation by recruitment

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Optimized survival of hippocampal neurons in B27-supplemented Neurobasal, a new serum-free medium combination

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Immediate mediators of the inflammatory response are poised for gene activation through RNA polymerase II stalling.

7 April 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Rapid activation of plasticity-associated gene transcription in hippocampal neurons provides a mechanism for encoding of one-trial experience

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

NELF-mediated stalling of Pol II can enhance gene expression by blocking promoter-proximal nucleosome assembly

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Poised RNA polymerase II gives pause for thought

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Promoter-proximal Pol II: when stalling speeds things up.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Cracking the RNA polymerase II CTD code

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Action potentials: to the nucleus and beyond.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Deregulation of cofactor of BRCA1 expression in breast cancer cells

29 September 2017

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Regulation of clustered gene expression by cofactor of BRCA1 (COBRA1) in breast cancer cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Breaking barriers to transcription elongation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Transcriptional pausing caused by NELF plays a dual role in regulating immediate-early expression of the junB gene

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

RETRACTED: Combinatorial effects of odorant mixes in olfactory cortex

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Late-phase long-term potentiation: getting to the nucleus.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Synapse to nucleus signaling during long-term synaptic plasticity; a role for the classical active nuclear import pathway

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

NELF and DSIF cause promoter proximal pausing on the hsp70 promoter in Drosophila

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Regulation of transcription factors by neuronal activity.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Capture of a protein synthesis-dependent component of long-term depression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Flavopiridol inhibits P-TEFb and blocks HIV-1 replication

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

A novel calcium signaling pathway targets the c-fos intragenic transcriptional pausing site

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Synaptic tagging and long-term potentiation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Distinct functions of nuclear and cytoplasmic calcium in the control of gene expression

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Requirement of a critical period of transcription for induction of a late phase of LTP.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Somatodendritic expression of an immediate early gene is regulated by synaptic activity

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

RNA polymerase II interacts with the promoter region of the noninduced hsp70 gene in Drosophila melanogaster cells

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Synchronous and stochastic patterns of gene activation in the Drosophila embryo

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

The RNA polymerase II molecule at the 5' end of the uninduced hsp70 gene of D. melanogaster is transcriptionally engaged.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Environment-specific expression of the immediate-early gene Arc in hippocampal neuronal ensembles.

3 June 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNN.2839

Spatial exploration-induced Arc mRNA and protein expression: evidence for selective, network-specific reactivation.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNN.2839

AMPA receptors regulate transcription of the plasticity-related immediate-early gene Arc.

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FNN.2839

Brain-derived neurotrophic factor triggers transcription-dependent, late phase long-term potentiation in vivo.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Experience-dependent gene expression in the rat hippocampus after spatial learning: a comparison of the immediate-early genes Arc, c-fos, and zif268.

27 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3125443

Long-term potentiation induced in dendrites separated from rat's CA1 pyramidal somata does not establish a late phase

27 November 2018

1 reference

https://pubmed.ncbi.nlm.nih.gov/21623364

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/NN.2839

1 reference

Dimensions Publication ID

1028354499

0 references

1 reference

1 reference

1 reference