Refining the pH response in Aspergillus nidulans: a modulatory triad involving PacX, a novel zinc binuclear cluster protein (Q28604239)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26303777%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

title

Refining the pH response in Aspergillus nidulans: a modulatory triad involving PacX, a novel zinc binuclear cluster protein (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26303777%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

Aspergillus nidulans

1 reference

2

1 reference

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22 February 2020

Eduardo A. Espeso

6

1 reference

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22 February 2020

Miguel A Penalva

12

1 reference

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22 February 2020

1

Henk-Jan Bussink

1 reference

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22 February 2020

Tatiana Múnera-Huertas

3

object named as

Tatiana Múnera-Huertas

1 reference

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22 February 2020

8

Joanna Rudnicka

1 reference

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22 February 2020

Susana Negrete-Urtasun

9

object named as

Susana Negrete-Urtasun

1 reference

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22 February 2020

11

Lynne Rainbow

1 reference

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22 February 2020

14

Joan Tilburn

1 reference

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22 February 2020

author name string

Daniel Lucena-Agell

4

1 reference

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22 February 2020

Claudio Scazzocchio

5

1 reference

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22 February 2020

Margherita Bertuzzi

7

1 reference

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22 February 2020

Maria M Peñas-Parilla

10

1 reference

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22 February 2020

Herbert N Arst

13

1 reference

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22 February 2020

language of work or name

English

0 references

publication date

16 October 2015

1 reference

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22 February 2020

published in

Molecular Microbiology

1 reference

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22 February 2020

volume

98

1 reference

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22 February 2020

issue

6

1 reference

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22 February 2020

page(s)

1051-1072

1 reference

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The pH-responsive PacC transcription factor of Aspergillus fumigatus governs epithelial entry and tissue invasion during pulmonary aspergillosis

22 February 2020

cites work

1 reference

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pH signaling in human fungal pathogens: a new target for antifungal strategies

17 March 2017

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Dating the diversification of the major lineages of Ascomycota (Fungi)

17 March 2017

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MAFFT Multiple Sequence Alignment Software Version 7: Improvements in Performance and Usability

17 March 2017

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New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0

17 March 2017

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ConSurf 2010: calculating evolutionary conservation in sequence and structure of proteins and nucleic acids

17 March 2017

1 reference

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Recruitment of the ESCRT machinery to a putative seven-transmembrane-domain receptor is mediated by an arrestin-related protein

17 March 2017

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Systematic identification of cell cycle-dependent yeast nucleocytoplasmic shuttling proteins by prediction of composite motifs

17 March 2017

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Transferrin receptor-like proteins control the degradation of a yeast metal transporter

17 March 2017

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Genomic sequence of the pathogenic and allergenic filamentous fungus Aspergillus fumigatus

17 March 2017

1 reference

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Components of the ESCRT pathway, DFG16, and YGR122w are required for Rim101 to act as a corepressor with Nrg1 at the negative regulatory element of the DIT1 gene of Saccharomyces cerevisiae.

17 March 2017

1 reference

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Relationship of DFG16 to the Rim101p pH response pathway in Saccharomyces cerevisiae and Candida albicans

17 March 2017

1 reference

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Characterization of the calcium-mediated response to alkaline stress in Saccharomyces cerevisiae.

17 March 2017

1 reference

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YPXL/I is a protein interaction motif recognized by aspergillus PalA and its human homologue, AIP1/Alix

17 March 2017

1 reference

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The transcription factor Rim101p governs ion tolerance and cell differentiation by direct repression of the regulatory genes NRG1 and SMP1 in Saccharomyces cerevisiae.

17 March 2017

1 reference

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The transcriptional response to alkaline pH in Saccharomyces cerevisiae: evidence for calcium-mediated signalling

17 March 2017

1 reference

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Yeast PalA/AIP1/Alix homolog Rim20p associates with a PEST-like region and is required for its proteolytic cleavage

17 March 2017

1 reference

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Alkaline response genes of Saccharomyces cerevisiae and their relationship to the RIM101 pathway

17 March 2017

1 reference

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Genetic analysis of regulatory mutants affecting synthesis of extracellular proteinases in the yeast Yarrowia lipolytica: identification of a RIM101/pacC homolog

17 March 2017

1 reference

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Proteolytic activation of Rim1p, a positive regulator of yeast sporulation and invasive growth

17 March 2017

1 reference

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Identification of functionally related genes that stimulate early meiotic gene expression in yeast.

17 March 2017

1 reference

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Molecular characterization of the yeast meiotic regulatory gene RIM1.

17 March 2017

1 reference

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Crystal structure of a PPR1-DNA complex: DNA recognition by proteins containing a Zn2Cys6 binuclear cluster

17 March 2017

1 reference

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UME6 is a key regulator of nitrogen repression and meiotic development

17 March 2017

1 reference

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Cleavage of Structural Proteins during the Assembly of the Head of Bacteriophage T4

17 March 2017

1 reference

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Predicting coiled coils from protein sequences

17 March 2017

1 reference

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Phylogeny.fr: robust phylogenetic analysis for the non-specialist

17 March 2017

1 reference

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Approximate likelihood-ratio test for branches: A fast, accurate, and powerful alternative

7 April 2017

1 reference

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Prediction and analysis of coiled-coil structures

7 April 2017

1 reference

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Analysis and prediction of leucine-rich nuclear export signals

7 April 2017

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The Cryptococcus neoformans alkaline response pathway: identification of a novel rim pathway activator

7 April 2017

1 reference

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Casein kinase 1 controls the activation threshold of an α-arrestin by multisite phosphorylation of the interdomain hinge.

29 September 2017

1 reference

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Liaison alcaline: Pals entice non-endosomal ESCRTs to the plasma membrane for pH signaling

29 September 2017

1 reference

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Neurospora crassa female development requires the PACC and other signal transduction pathways, transcription factors, chromatin remodeling, cell-to-cell fusion, and autophagy

29 September 2017

1 reference

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Signaling events of the Rim101 pathway occur at the plasma membrane in a ubiquitination-dependent manner

29 September 2017

1 reference

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Estimating the Phanerozoic history of the Ascomycota lineages: combining fossil and molecular data.

29 September 2017

1 reference

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MrpacC regulates sporulation, insect cuticle penetration and immune evasion in Metarhizium robertsii

29 September 2017

1 reference

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The Cryptococcus neoformans Rim101 transcription factor directly regulates genes required for adaptation to the host

29 September 2017

1 reference

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The Aspergillus Genome Database: multispecies curation and incorporation of RNA-Seq data to improve structural gene annotations

29 September 2017

1 reference

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Adaptation to pH and role of PacC in the rice blast fungus Magnaporthe oryzae

29 September 2017

1 reference

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PacC and pH-dependent transcriptome of the mycotrophic fungus Trichoderma virens.

29 September 2017

1 reference

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pH Response Pathways in Fungi: Adapting to Host-derived and Environmental Signals.

29 September 2017

1 reference

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The β-arrestin-like protein Rim8 is hyperphosphorylated and complexes with Rim21 and Rim101 to promote adaptation to neutral-alkaline pH.

29 September 2017

1 reference

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An ordered pathway for the assembly of fungal ESCRT-containing ambient pH signalling complexes at the plasma membrane

29 September 2017

1 reference

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Rescue of Aspergillus nidulans severely debilitating null mutations in ESCRT-0, I, II and III genes by inactivation of a salt-tolerance pathway allows examination of ESCRT gene roles in pH signalling

29 September 2017

1 reference

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BMGE (Block Mapping and Gathering with Entropy): a new software for selection of phylogenetic informative regions from multiple sequence alignments

29 September 2017

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The Ascomycota tree of life: a phylum-wide phylogeny clarifies the origin and evolution of fundamental reproductive and ecological traits

29 September 2017

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Receptor-independent Ambient pH signaling by ubiquitin attachment to fungal arrestin-like PalF.

29 September 2017

1 reference

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Interaction of Cryptococcus neoformans Rim101 and protein kinase A regulates capsule.

29 September 2017

1 reference

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Organization and dynamics of the Aspergillus nidulans Golgi during apical extension and mitosis.

29 September 2017

1 reference

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How human pathogenic fungi sense and adapt to pH: the link to virulence

29 September 2017

1 reference

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Roles of the pH signaling transcription factor PacC in Wangiella (Exophiala) dermatitidis

29 September 2017

1 reference

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Candida albicans transcription factor Rim101 mediates pathogenic interactions through cell wall functions

29 September 2017

1 reference

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Ambient pH gene regulation in fungi: making connections.

29 September 2017

1 reference

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ngLOC: an n-gram-based Bayesian method for estimating the subcellular proteomes of eukaryotes

29 September 2017

1 reference

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Evidence for novel pH-dependent regulation of Candida albicans Rim101, a direct transcriptional repressor of the cell wall beta-glycosidase Phr2.

29 September 2017

1 reference

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A fungal family of transcriptional regulators: the zinc cluster proteins

29 September 2017

1 reference

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29 September 2017

1 reference

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The RIM101/pacC homologue from the basidiomycete Ustilago maydis is functional in multiple pH-sensitive phenomena

29 September 2017

1 reference

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Transcriptional profiling in Candida albicans reveals new adaptive responses to extracellular pH and functions for Rim101p

29 September 2017

1 reference

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Recent advances in the characterization of ambient pH regulation of gene expression in filamentous fungi and yeasts

29 September 2017

1 reference

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Rapid production of gene replacement constructs and generation of a green fluorescent protein-tagged centromeric marker in Aspergillus nidulans

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Multivesicular body-ESCRT components function in pH response regulation in Saccharomyces cerevisiae and Candida albicans

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Candida albicans Rim13p, a protease required for Rim101p processing at acidic and alkaline pHs.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Biosynthesis and uptake of siderophores is controlled by the PacC-mediated ambient-pH Regulatory system in Aspergillus nidulans

29 September 2017

1 reference

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Adaptation to environmental pH in Candida albicans and its relation to pathogenesis

29 September 2017

1 reference

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Activation of the Aspergillus PacC zinc finger transcription factor requires two proteolytic steps.

29 September 2017

1 reference

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Candida albicans RIM101 pH response pathway is required for host-pathogen interactions

29 September 2017

1 reference

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Single-primer PCR procedure for rapid identification of transposon insertion sites

29 September 2017

1 reference

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On the mechanism by which alkaline pH prevents expression of an acid-expressed gene

29 September 2017

1 reference

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On how a transcription factor can avoid its proteolytic activation in the absence of signal transduction.

29 September 2017

1 reference

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RIM101-dependent and-independent pathways govern pH responses in Candida albicans

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Effect of environmental pH on morphological development of Candida albicans is mediated via the PacC-related transcription factor encoded by PRR2.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

PRR1, a homolog of Aspergillus nidulans palF, controls pH-dependent gene expression and filamentation in Candida albicans

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Specificity determinants of proteolytic processing of Aspergillus PacC transcription factor are remote from the processing site, and processing occurs in yeast if pH signalling is bypassed

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

The sequence of palF, an environmental pH response gene in Aspergillus nidulans.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Characterization of the pH signal transduction pathway gene palA of Aspergillus nidulans and identification of possible homologs

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Comparative amino acid sequence analysis of the C6 zinc cluster family of transcriptional regulators.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

The Aspergillus PacC zinc finger transcription factor mediates regulation of both acid- and alkaline-expressed genes by ambient pH.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

The sequence and binding specificity of UaY, the specific regulator of the purine utilization pathway in Aspergillus nidulans, suggest an evolutionary relationship with the PPR1 protein of Saccharomyces cerevisiae

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Coiled-coils in alpha-helix-containing proteins: analysis of the residue types within the heptad repeat and the use of these data in the prediction of coiled-coils in other proteins

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Chromosome-specific recombinant DNA libraries from the fungus Aspergillus nidulans

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

DNA recognition by GAL4: structure of a protein-DNA complex.

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Dominant negative selection of heterologous genes: isolation of Candida albicans genes that interfere with Saccharomyces cerevisiae mating factor-induced cell cycle arrest

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Chlorate toxicity in Aspergillus nidulans. Studies of mutants altered in nitrate assimilation

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Aspergillus nidulans Ambient pH Signaling Does Not Require Endocytosis

29 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

PalC, one of two Bro1 domain proteins in the fungal pH signalling pathway, localizes to cortical structures and binds Vps32.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Further characterization of the signaling proteolysis step in the Aspergillus nidulans pH signal transduction pathway.

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Evolution of a fungal regulatory gene family: the Zn(II)2Cys6 binuclear cluster DNA binding motif

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Cloning an Aspergillus nidulans developmental gene by transformation

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Mitotic induction and maintenance by overexpression of a G2-specific gene that encodes a potential protein kinase

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Aspergillus nidulans contains a single actin gene which has unique intron locations and encodes a gamma-actin

3 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4832277

Global aspects of pacC regulation of pathogenicity genes in Colletotrichum gloeosporioides as revealed by transcriptome analysis

3 June 2018

1 reference

The Aspergillus pH-responsive transcription factor PacC regulates virulence.

21 January 2018

1 reference

Establishment of the ambient pH signaling complex in Aspergillus nidulans: PalI assists plasma membrane localization of PalH.

21 January 2018

1 reference

The pH signalling transcription factor PacC controls virulence in the plant pathogen Fusarium oxysporum

21 January 2018

1 reference

The AzgA purine transporter of Aspergillus nidulans. Characterization of a protein belonging to a new phylogenetic cluster.

21 January 2018

1 reference

ConSurf: Using Evolutionary Data to Raise Testable Hypotheses about Protein Function

21 January 2018

1 reference

Signaling of ambient pH in Aspergillus involves a cysteine protease

21 January 2018

1 reference

Putative membrane components of signal transduction pathways for ambient pH regulation in Aspergillus and meiosis in saccharomyces are homologous

21 January 2018

1 reference

Overlap of nuclear localisation signal and specific DNA-binding residues within the zinc finger domain of PacC.

21 January 2018

1 reference

Evidence for the direct involvement of the proteasome in the proteolytic processing of the Aspergillus nidulans zinc finger transcription factor PacC.

21 January 2018

1 reference

Modelling the activation of alkaline pH response transcription factor PacC in Aspergillus nidulans: involvement of a negative feedback loop

21 January 2018

1 reference

Ambient pH signal transduction in Aspergillus: completion of gene characterization

21 January 2018

1 reference

Arginine catabolism in Aspergillus nidulans is regulated by the rrmA gene coding for the RNA-binding protein

21 January 2018

1 reference

Characterization of Aspergillus nidulans RabC/Rab6.

21 January 2018

1 reference

Tracing the endocytic pathway of Aspergillus nidulans with FM4-64.

21 January 2018

1 reference

Physiological involvement in pH signaling of Vps24-mediated recruitment of Aspergillus PalB cysteine protease to ESCRT-III.

21 January 2018

1 reference

Function and regulation of the Saccharomyces cerevisiae ENA sodium ATPase system.

21 January 2018

1 reference

Fungal biology in the post-genomic era.

21 January 2018

1 reference

Expression and promoter characterization of BbPacC, a pH response transcription factor gene of the entomopathogenic fungus Beauveria bassiana

21 January 2018

1 reference

PacC in the nematophagous fungus Clonostachys rosea controls virulence to nematodes

21 January 2018

1 reference

The analysis of the transcriptional activator PrnA reveals a tripartite nuclear localisation sequence

21 January 2018

1 reference

12 December 2020

Ambient pH signaling regulates nuclear localization of the Aspergillus nidulans PacC transcription factor

1 reference

12 December 2020

Heterologous transposition in Aspergillus nidulans

1 reference

12 December 2020

GENETIC ANALYSIS OF THE PHOSPHATASES IN ASPERGILLUS NIDULANS

1 reference

12 December 2020

pH and Pac1 control development and antifungal activity in Trichoderma harzianum

1 reference

12 December 2020

Influence of pH on the growth of some toxigenic species of Aspergillus, Penicillium and Fusarium

1 reference

12 December 2020

Identical domains of Yarrowia lipolytica Vps23 are required for both ESCRT and Rim pathways, but the latter needs an interaction between the Vps23 UEV domain and Rim8/PalF

1 reference

12 December 2020

Regulation of gene expression by pH of the growth medium in Aspergillus nidulans

1 reference

12 December 2020

The induction and repression of nitrate reductase in the fungus Aspergillus nidulans

1 reference

12 December 2020

Activation of the Aspergillus PacC transcription factor in response to alkaline ambient pH requires proteolysis of the carboxy-terminal moiety

1 reference

12 December 2020

Two new genes involved in signalling ambient pH in Aspergillus nidulans

1 reference

12 December 2020

Three binding sites for the Aspergillus nidulans PacC zinc-finger transcription factor are necessary and sufficient for regulation by ambient pH of the isopenicillin N synthase gene promoter

1 reference

12 December 2020

Identifiers

DOI

10.1111/MMI.13173

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26303777%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

1 reference

2 references

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26303777%20AND%20SRC:MED&resulttype=core&format=json

22 February 2020

PubMed publication ID

26303777

2 references