Web services at the European bioinformatics institute (Q28757278)

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scientific article (publication date: July 2007)

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Language	Label	Description	Also known as
English	Web services at the European bioinformatics institute	scientific article (publication date: July 2007)

Statements

instance of

scholarly article

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title

Web services at the European bioinformatics institute (English)

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main subject

bioinformatics

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web service

1 reference

based on heuristic

inferred from title

author

Alberto Labarga

series ordinal

1

object named as

Alberto Labarga

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Rodrigo López

series ordinal

4

object named as

Rodrigo Lopez

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author name string

Franck Valentin

series ordinal

2

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Mikael Anderson

series ordinal

3

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language of work or name

English

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publication date

July 2007

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published in

Nucleic Acids Research

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volume

35

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issue

Web Server issue

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page(s)

W6-11

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cites work

Taverna: a tool for building and running workflows of services

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

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16 March 2017

From genomics to chemical genomics: new developments in KEGG

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

Database resources of the National Center for Biotechnology Information

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

Kalign--an accurate and fast multiple sequence alignment algorithm

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

ProFunc: a server for predicting protein function from 3D structure

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

SOAP-based services provided by the European Bioinformatics Institute

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

InterProScan: protein domains identifier

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

MAFFT version 5: improvement in accuracy of multiple sequence alignment

1 reference

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PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

The European Bioinformatics Institute's data resources: towards systems biology

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

Integr8 and Genome Reviews: integrated views of complete genomes and proteomes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

MUSCLE: multiple sequence alignment with high accuracy and high throughput

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

The Jalview Java alignment editor

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

EnsMart: a generic system for fast and flexible access to biological data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

ELM server: A new resource for investigating short functional sites in modular eukaryotic proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

DaliLite workbench for protein structure comparison

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

T-Coffee: A novel method for fast and accurate multiple sequence alignment

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

EMBOSS: the European Molecular Biology Open Software Suite

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

Gene ontology: tool for the unification of biology

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

Identification of common molecular subsequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

A general method applicable to the search for similarities in the amino acid sequence of two proteins

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

Improved tools for biological sequence comparison

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

Basic local alignment search tool

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

16 March 2017

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

7 April 2017

BIND: the Biomolecular Interaction Network Database

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

7 April 2017

New developments in the InterPro database

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

3 June 2018

EMBL Nucleotide Sequence Database in 2006.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

3 June 2018

The Universal Protein Resource (UniProt).

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

3 June 2018

The Ontology Lookup Service, a lightweight cross-platform tool for controlled vocabulary queries

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

3 June 2018

BioMOBY successfully integrates distributed heterogeneous bioinformatics Web Services. The PlaNet exemplar case

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

3 June 2018

Public web-based services from the European Bioinformatics Institute

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

3 June 2018

DDBJ in the stream of various biological data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

3 June 2018

A life scientist's gateway to distributed data management and computing: the PathPort/ToolBus framework

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

3 June 2018

Database algorithm for generating protein backbone and side-chain co-ordinates from a C alpha trace application to model building and detection of co-ordinate errors.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1933145

retrieved

3 June 2018

Identifiers

DOI

10.1093/NAR/GKM291

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3303389

DBLP publication ID

journals/nar/LabargaVAL07

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

Fatcat ID

release_tc6mwelg3rbnpgqjfqr26v3y5i

1 reference

stated in

Fatcat

reference URL

https://api.fatcat.wiki/v0/release/tc6mwelg3rbnpgqjfqr26v3y5i

retrieved

24 November 2022

based on heuristic

mapped directly with Wikidata item

OpenCitations bibliographic resource ID

3303389

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3303389

PMC publication ID

1933145

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3303389

PubMed publication ID

17576686

1 reference

stated in

Consolidated OpenCitations Corpus – April 2017

OpenCitations bibliographic resource ID

3303389

ResearchGate publication ID

6259846

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