Clostridium sticklandii, a specialist in amino acid degradation:revisiting its metabolism through its genome sequence (Q21267210)

19 August 2022

9

Valérie Barbe

Valérie

Barbe

1 reference

19 August 2022

8

Michel Gouyvenoux

Michel

Gouyvenoux

1 reference

19 August 2022

7

Eric Pelletier

Eric

Pelletier

1 reference

19 August 2022

10

Marcel Salanoubat

Marcel

Salanoubat

1 reference

19 August 2022

Denis Le Paslier

11

Denis

Le Paslier

1 reference

19 August 2022

14

Annett

Kreimeyer

Annett Kreimeyer

1 reference

19 August 2022

1

Nuria

Fonknechten

Nuria Fonknechten

1 reference

19 August 2022

4

Aurélie

Lajus

Aurélie Lajus

1 reference

19 August 2022

Sébastien Chaussonnerie

2

Sébastien

Chaussonnerie

Sébastien Chaussonnerie

1 reference

19 August 2022

6

Nadia

Perchat

Nadia Perchat

1 reference

19 August 2022

Sabine Tricot

3

Sabine

Tricot

1 reference

19 August 2022

Jan R Andreesen

series ordinal

5

author given names

Jan R

author last names

Andreesen

1 reference

19 August 2022

Georges N Cohen

series ordinal

13

author given names

Georges N

author last names

Cohen

1 reference

Functions and evolution of selenoprotein methionine sulfoxide reductases

19 August 2022

language of work or name

English

0 references

publication date

2010

0 references

published in

BMC Genomics

0 references

volume

11

0 references

issue

1

0 references

page(s)

555

0 references

cites work

1 reference

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MaGe: a microbial genome annotation system supported by synteny results

19 March 2017

1 reference

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Life in hot carbon monoxide: the complete genome sequence of Carboxydothermus hydrogenoformans Z-2901

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

19 March 2017

The Stickland reaction

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

The genome sequence of Clostridium tetani, the causative agent of tetanus disease

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Chemical characterization of the selenoprotein component of clostridial glycine reductase: identification of selenocysteine as the organoselenium moiety

19 March 2017

1 reference

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A functional Ni-Ni-[4Fe-4S] cluster in the monomeric acetyl-CoA synthase from Carboxydothermus hydrogenoformans

19 March 2017

1 reference

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PerR acts as a switch for oxygen tolerance in the strict anaerobe Clostridium acetobutylicum

19 March 2017

1 reference

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In vitro processing of the proproteins GrdE of protein B of glycine reductase and PrdA of D-proline reductase from Clostridium sticklandii: formation of a pyruvoyl group from a cysteine residue

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Identification of D-proline reductase from Clostridium sticklandii as a selenoenzyme and indications for a catalytically active pyruvoyl group derived from a cysteine residue by cleavage of a proprotein

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Amino acid utilization patterns in clostridial taxonomy

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

MicroScope: a platform for microbial genome annotation and comparative genomics

19 March 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

A conserved gene cluster rules anaerobic oxidative degradation of L-ornithine

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

The ins and outs of Na(+) bioenergetics in Acetobacterium woodii

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Transformation of inorganic and organic arsenic by Alkaliphilus oremlandii sp. nov. strain OhILAs

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

The genome of Clostridium kluyveri, a strict anaerobe with unique metabolic features.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Energy conservation via electron-transferring flavoprotein in anaerobic bacteria

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

H+-PPases: yesterday, today and tomorrow.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Structural insights into the mechanism of the PLP synthase holoenzyme from Thermotoga maritima

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Analysis of proline reduction in the nosocomial pathogen Clostridium difficile.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Studies in the metabolism of the strict anaerobes (genus Clostridium): The chemical reactions by which Cl. sporogenes obtains its energy

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Iron-sulphur clusters and the problem with oxygen

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Glycine reductase mechanism

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Dehydration of (R)-2-hydroxyacyl-CoA to enoyl-CoA in the fermentation of alpha-amino acids by anaerobic bacteria

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Alkaline anaerobic respiration: isolation and characterization of a novel alkaliphilic and metal-reducing bacterium

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Studies on the methane fermentation. X. A new formate-decomposing bacterium, Methanococcus vannielii.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Clostridium sticklandii nov. spec.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Tracer studies on ornithine, lysine, and formate metabolism in an amino acid fermenting Clostridium

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

On the metabolism of an amino acid fermenting Clostridium.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

AMIGene: Annotation of MIcrobial Genes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

ATP synthases: structure, function and evolution of unique energy converters.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Unusual enzymes involved in five pathways of glutamate fermentation

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Anaerobic microbes: oxygen detoxification without superoxide dismutase.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

The phylogeny of the genus Clostridium: proposal of five new genera and eleven new species combinations.

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Two pathways of glutamate fermentation by anaerobic bacteria

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Ornithine cyclase (deaminating). Purification of a protein that converts ornithine to proline and definition of the optimal assay conditions

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Discoveries of vitamin B12 and selenium enzymes

12 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Glycine metabolism in anaerobes

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Amino acid degradation by anaerobic bacteria

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

NADH-dependent reduction of d-proline in Clostridium sticklandii. Reconstitution from three fractions containing NADH dehydrogenase, d-proline reductase, and a third protein factor

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Development of a Selective Medium for the Isolation ofClostridium sporogenesand Related Organisms

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Coupled ferredoxin and crotonyl coenzyme A (CoA) reduction with NADH catalyzed by the butyryl-CoA dehydrogenase/Etf complex from Clostridium kluyveri

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Purification of protein components of the clostridial glycine reductase system and characterization of protein A as a selenoprotein

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

An allylic ketyl radical intermediate in clostridial amino-acid fermentation

30 May 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Identification of the last unknown genes in the fermentation pathway of lysine

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Peroxidase activity of selenoprotein GrdB of glycine reductase and stabilisation of its integrity by components of proprotein GrdE from Eubacterium acidaminophilum.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Molecular and biochemical characterization of two tungsten- and selenium-containing formate dehydrogenases from Eubacterium acidaminophilum that are associated with components of an iron-only hydrogenase

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Cloning, sequencing, heterologous expression, purification, and characterization of adenosylcobalamin-dependent D-lysine 5, 6-aminomutase from Clostridium sticklandii

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Proline biosynthesis from L-ornithine in Clostridium sticklandii: purification of delta1-pyrroline-5-carboxylate reductase, and sequence and expression of the encoding gene, proC.

29 November 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3091704

Automated enantioseparation of amino acids by derivatization with o-phthaldialdehyde and n-acylated cysteines

29 November 2018

1 reference

12 December 2020

Catabolism of purines in clostridium sticklandii [proceedings]

1 reference

12 December 2020

New amino acids, and heterocyclic compounds participating in the Stickland reaction of Clostridium sticklandii

1 reference

12 December 2020

2-oxypurine dehydrogenase from Micrococcus aerogenes. I. Isolation, specificity, and some chemical and physical properties

1 reference

12 December 2020

[Glucose metabolism in Clostridium sporogenes and Clostridium sticklandii bacteria]

1 reference

12 December 2020

Purification and properties of proline reductase from Clostridium sticklandii

1 reference

12 December 2020

Purification and characterization of threonine dehydrogenase from Clostridium sticklandii

1 reference

12 December 2020

Volatile acid production from threonine, valine, leucine and isoleucine by clostridia

1 reference

12 December 2020

The end products of the metabolism of aromatic amino acids by clostridia

1 reference

12 December 2020

Mechanism of action of clostridial glycine reductase: isolation and characterization of a covalent acetyl enzyme intermediate

1 reference

12 December 2020

The Amino Acid-fermenting Clostridia

1 reference

12 December 2020

Eubacterium acidaminophilum sp. nov., a versatile amino acid-degrading anaerobe producing or utilizing H2 or formate

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-11-555

7 January 2021

inferred from DOI database lookup

In vitroprocessing of the proproteins GrdE of protein B of glycine reductase and PrdA of D-proline reductase fromClostridium sticklandii

1 reference

Crossref

https://api.crossref.org/works/10.1186%2F1471-2164-11-555

7 January 2021

inferred from DOI database lookup

Identifiers

DOI

10.1186/1471-2164-11-555

1 reference

release_4xu6ee2uhngwtkywm6a5e73tse

0 references

Fatcat ID

0 references

1 reference

1 reference

PubMed publication ID

20937090

1 reference