Evolution and taxonomy of positive-strand RNA viruses: implications of comparative analysis of amino acid sequences (Q22064551)

Europe PubMed Central

title

Evolution and Taxonomy of Positive-Strand RNA Viruses: Implications of Comparative Analysis of Amino Acid Sequences (English)

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1 reference

1

E V Koonin

E V

Koonin

1 reference

PubMed

PubMed publication ID

7 February 2023

Valerian V. Dolja

2

V V

Dolja

1 reference

PubMed

PubMed publication ID

8269709

Critical Reviews in Biochemistry and Molecular Biology

7 February 2023

T. Jack Morris

series ordinal

3

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language of work or name

English

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publication date

January 1993

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published in

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volume

28

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issue

5

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page(s)

375-430

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cites work

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Nucleotide sequence analyses of peanut stunt cucumovirus RNAs 1 and 2

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Nucleotide sequence of RNA 3 of peanut stunt cucumovirus

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Molecular cloning of the human hepatitis C virus genome from Japanese patients with non-A, non-B hepatitis

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21 January 2018

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The phylogeny of RNA-dependent RNA polymerases of positive-strand RNA viruses

21 January 2018

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21 January 2018

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Tentative identification of RNA-dependent RNA polymerases of dsRNA viruses and their relationship to positive strand RNA viral polymerases

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21 January 2018

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21 January 2018

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21 January 2018

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Nucleotide sequence of narcissus mosaic virus RNA.

21 January 2018

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21 January 2018

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21 January 2018

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The complete nucleotide sequence of plum pox virus RNA.

21 January 2018

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Viral taxonomy for the nonvirologist

21 January 2018

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Nucleotide sequence of a cloned cDNA copy of TMV (cowpea strain) RNA, including the assembly origin, the coat protein cistron, and the 3' non-coding region

21 January 2018

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Lelystad virus, the causative agent of porcine epidemic abortion and respiratory syndrome (PEARS), is related to LDV and EAV.

21 January 2018

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Viral cytopathogenicity correlated with integration of ubiquitin-coding sequences

21 January 2018

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Molecular cloning and nucleotide sequence of the genome of hog cholera virus

21 January 2018

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21 January 2018

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Association of the Sindbis virus RNA methyltransferase activity with the nonstructural protein nsP1.

21 January 2018

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Sequence and organization of barley yellow dwarf virus genomic RNA.

21 January 2018

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Overlapping open reading frames revealed by complete nucleotide sequencing of turnip yellow mosaic virus genomic RNA

21 January 2018

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Nucleotide sequence of tomato aspermy virus RNA 2.

21 January 2018

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Probable reassortment of genomic elements among elongated RNA-containing plant viruses

21 January 2018

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Primary structure and gene organization of human hepatitis A virus

21 January 2018

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Nucleotide sequence of raspberry bushy dwarf virus RNA-2: a bicistronic component of a bipartite genome

21 January 2018

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Nucleotide sequence of the virulent SA-14 strain of Japanese encephalitis virus and its attenuated vaccine derivative, SA-14-14-2.

21 January 2018

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Identification of essential residues in potyvirus proteinase HC-Pro by site-directed mutagenesis

21 January 2018

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Tomato aspermy virus has an evolutionary relationship with other tripartite RNA plant viruses

21 January 2018

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Nucleotide sequence of the genome of eggplant mosaic tymovirus

21 January 2018

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Insights into Theiler's virus neurovirulence based on a genomic comparison of the neurovirulent GDVII and less virulent BeAn strains

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Nucleotide sequence of the genome and complete amino acid sequence of the polyprotein of tick-borne encephalitis virus

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Use of Chenopodium hybridum facilitates isolation of brome mosaic virus RNA recombinants

21 January 2018

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Nucleotide sequence of cucumber-mosaic-virus RNA 2 reveals a translation product significantly homologous to corresponding proteins of other viruses

21 January 2018

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Nucleotide sequence of cucumber mosaic virus RNA. 1. Presence of a sequence complementary to part of the viral satellite RNA and homologies with other viral RNAs

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Nucleotide sequence of yellow fever virus: implications for flavivirus gene expression and evolution

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Nucleotide sequence and genomic organization of melon necrotic spot virus

21 January 2018

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Nucleotide sequence of potato virus Y (N Strain) genomic RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Complete nucleotide sequence of the cucumber necrosis virus genome

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

The nucleotide sequence and genome organization of the RNA2 and RNA3 segments in broad bean mottle virus

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Icosahedral RNA virus structure

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Conservation of the putative methyltransferase domain: a hallmark of the 'Sindbis-like' supergroup of positive-strand RNA viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Molecular cloning and nucleotide sequencing of the coat protein gene of citrus tristeza virus.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Genomic RNA of an insect virus directs synthesis of infectious virions in plants

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

RNA2 of grapevine fanleaf virus: sequence analysis and coat protein cistron location

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

The primary structure of red clover mottle virus middle component RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

The nucleotide sequence of red clover mottle virus bottom component RNA

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Nucleotide sequence and genomic organization of rice tungro spherical virus

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Complete nucleotide sequence and organization of the bipartite RNA genome of soil-borne wheat mosaic virus

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Nucleotide sequence of papaya mosaic virus RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Human rhinovirus 2: complete nucleotide sequence and proteolytic processing signals in the capsid protein region.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

The carboxyl-terminal part of the putative Berne virus polymerase is expressed by ribosomal frameshifting and contains sequence motifs which indicate that toro- and coronaviruses are evolutionarily related

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Early evolution and the origin of eukaryotes

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Structure, function and evolution of picornaviruses

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

The complete nucleotide sequence of a common cold virus: human rhinovlrus 14

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Complete nucleotide sequence of the genomic RNA of Sindbis virus

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

21 January 2018

Evolution of RNA viruses

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Molecular organization of Leishmania RNA virus 1

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Complete nucleotide sequence of the nonstructural protein genes of Semliki Forest virus

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Hepatitis E virus (HEV): molecular cloning and sequencing of the full-length viral genome

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Analysis of the functional significance of amino acid residues in the putative NTP-binding pattern of the poliovirus 2C protein

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Simian hepatitis A virus (HAV) strain AGM-27: comparison of genome structure and growth in cell culture with other HAV strains

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

The nucleotide sequence of parsnip yellow fleck virus: a plant picorna-like virus

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

The three-dimensional structure of the bacterial virus MS2.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

The complete nucleotide sequence of pepper mottle virus genomic RNA: comparison of the encoded polyprotein with those of other sequenced potyviruses

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Nucleotide sequence and organization of potato leafroll virus genomic RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Nucleotide sequence of beet western yellows virus RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

The 35-kDa protein from the N-terminus of the potyviral polyprotein functions as a third virus-encoded proteinase

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Mutational analysis of the tobacco etch potyviral 35-kDa proteinase: identification of essential residues and requirements for autoproteolysis

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Nucleotide sequence analysis and genomic organization of the NY-RPV isolate of barley yellow dwarf virus

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

In vitro synthesis of West Nile virus proteins indicates that the amino-terminal segment of the NS3 protein contains the active centre of the protease which cleaves the viral polyprotein after multiple basic amino acids

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

The carboxy-terminal part of the NS 3 protein of the West Nile Flavivirus can be isolated as a soluble protein after proteolytic cleavage and represents an RNA-stimulated NTPase

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Sequence and organization of southern bean mosaic virus genomic RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

The complete nucleotide sequence and genome organization of red clover necrotic mosaic virus RNA-1.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

The nucleotide sequence of apple stem grooving capillovirus genome

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

The genome organization of potato virus M RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

The nucleotide sequence of RNA-1 of raspberry bushy dwarf virus

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Multiple alignment and hierachical clustering of conserved amino acid sequences in the replication-associated proteins of plant RNA viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

A conserved NTP-motif in putative helicases

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

N-terminal domains of putative helicases of flavi- and pestiviruses may be serine proteases

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

A new superfamily of putative NTP-binding domains encoded by genomes of small DNA and RNA viruses

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

A new superfamily of replicative proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

Similarities in RNA helicases

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

21 January 2018

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

The nucleotide sequence of cowpea mosaic virus B RNA.

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Homologous sequences in non-structural proteins from cowpea mosaic virus and picornaviruses

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Identification of four conserved motifs among the RNA-dependent polymerase encoding elements

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Origin and evolution of retroelements based upon their reverse transcriptase sequences

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Identification of barley stripe mosaic virus genes involved in viral RNA replication and systemic movement.

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Unexpected close relationship between the large nonvirion proteins of filamentous potexviruses and spherical tymoviruses

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Intertypic recombination in poliovirus: genetic and biochemical studies

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Pestivirus gene expression: Protein p80 of bovine viral diarrhea virus is a proteinase involved in polyprotein processing

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Genetic analysis of an NTP-binding motif in poliovirus polypeptide 2C

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

https://api.crossref.org/works/10.3109%2F10409239309078440

1 reference

7 January 2021

Proteins covalently linked to viral genomes.

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Cardioviral internal ribosomal entry site is functional in a genetically engineered dicistronic poliovirus

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Phylogeny of capsid proteins of small icosahedral RNA plant viruses

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Natural selection, protein engineering, and the last riboorganism: rational model building in biochemistry

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Processing the nonstructural polyproteins of sindbis virus: nonstructural proteinase is in the C-terminal half of nsP2 and functions both in cis and in trans

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Proteolytic origin of the 150-kilodalton protein encoded by turnip yellow mosaic virus genomic RNA.

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Site-directed mutagenesis of the proposed catalytic amino acids of the Sindbis virus capsid protein autoprotease

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021

Expression and Function of Potyviral Gene Products

1 reference

https://api.crossref.org/works/10.3109%2F10409239309078440

7 January 2021