Stop codons preceded by rare arginine codons are efficient determinants of SsrA tagging in Escherichia coli (Q34018416)

30 July 2017

title

Stop codons preceded by rare arginine codons are efficient determinants of SsrA tagging in Escherichia coli (English)

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30 July 2017

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Christopher S Hayes

1

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30 July 2017

Baundauna Bose

series ordinal

2

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30 July 2017

Robert T Sauer

series ordinal

3

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30 July 2017

language of work or name

English

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publication date

12 March 2002

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Proceedings of the National Academy of Sciences of the United States of America

30 July 2017

published in

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30 July 2017

volume

99

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30 July 2017

issue

6

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30 July 2017

page(s)

3440-3445

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The tRNA function of SsrA contributes to controlling repression of bacteriophage Mu prophage.

30 July 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

Identification of endogenous SsrA-tagged proteins reveals tagging at positions corresponding to stop codons.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

A post-translational modification in the GGQ motif of RF2 from Escherichia coli stimulates termination of translation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

SsrA-mediated tagging and proteolysis of LacI and its role in the regulation of lac operon

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

The SsrA-SmpB system for protein tagging, directed degradation and ribosome rescue

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

Resuming translation on tmRNA: a unique mode of determining a reading frame

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

SsrA-mediated peptide tagging caused by rare codons and tRNA scarcity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

A direct estimation of the context effect on the efficiency of termination

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

Degradation of carboxy-terminal-tagged cytoplasmic proteins by the Escherichia coli protease HflB (FtsH)

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

The ClpXP and ClpAP proteases degrade proteins with carboxy-terminal peptide tails added by the SsrA-tagging system

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

A bacterial RNA that functions as both a tRNA and an mRNA.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

The close proximity of Escherichia coli genes: consequences for stop codon and synonymous codon use.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

Three, four or more: the translational stop signal at length

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

Role of a peptide tagging system in degradation of proteins synthesized from damaged messenger RNA

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

Role for 10Sa RNA in the growth of lambda-P22 hybrid phage

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

Factor for inversion stimulation-dependent growth rate regulation of serine and threonine tRNA species.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

C-terminal extension of truncated recombinant proteins in Escherichia coli with a 10Sa RNA decapeptide.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

A tRNA-like structure is present in 10Sa RNA, a small stable RNA from Escherichia coli

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

Molecular cloning and characterization of genes required for ribose transport and utilization in Escherichia coli K-12

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

Ribokinase from Escherichia coli K12. Nucleotide sequence and overexpression of the rbsK gene and purification of ribokinase

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

Signal transduction by DR3, a death domain-containing receptor related to TNFR-1 and CD95

5 July 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052707199

In vitro trans translation mediated by alanine-charged 10Sa RNA.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052707199

A role for a small stable RNA in modulating the activity of DNA-binding proteins

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052707199

Co-variation of tRNA abundance and codon usage in Escherichia coli at different growth rates.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052707199

The concentration of polypeptide chain release factors 1 and 2 at different growth rates of Escherichia coli.

21 January 2018

1 reference

https://api.crossref.org/works/10.1073%2FPNAS.052707199

Factor for inversion stimulation-dependent growth rate regulation of individual tRNA species in Escherichia coli.

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=122542

29 October 2018

Identifiers

DOI

10.1073/PNAS.052707199

1 reference

30 July 2017

0 references

1 reference

30 July 2017

1 reference