Free energy landscapes of encounter complexes in protein-protein association (Q34169869)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10049302%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

title

Free energy landscapes of encounter complexes in protein-protein association (English)

1 reference

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11 November 2019

1 reference

3

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11 November 2019

author name string

Camacho CJ

series ordinal

1

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11 November 2019

Weng Z

series ordinal

2

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11 November 2019

DeLisi C

series ordinal

4

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11 November 2019

language of work or name

English

0 references

publication date

1 March 1999

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11 November 2019

number of pages

13

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based on heuristic

inferred from page(s)

published in

Biophysical Journal

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11 November 2019

volume

76

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11 November 2019

issue

3

1 reference

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11 November 2019

page(s)

1166-1178

1 reference

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Empirical free energy calculation: comparison to calorimetric data

11 November 2019

cites work

1 reference

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Consistency in structural energetics of protein folding and peptide recognition

5 July 2018

1 reference

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Simulation of the diffusional association of barnase and barstar.

5 July 2018

1 reference

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Determination of atomic desolvation energies from the structures of crystallized proteins.

5 July 2018

1 reference

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Role of hydration and water structure in biological and colloidal interactions

5 July 2018

1 reference

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Kinetics and thermodynamics of folding in model proteins

5 July 2018

1 reference

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Water: now you see it, now you don't

5 July 2018

1 reference

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Do salt bridges stabilize proteins? A continuum electrostatic analysis.

5 July 2018

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Classical electrostatics in biology and chemistry

5 July 2018

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Solvent accessibility as a predictive tool for the free energy of inhibitor binding to the HIV-1 protease

5 July 2018

1 reference

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Flexible Docking and Design

5 July 2018

1 reference

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A continuum model for protein-protein interactions: application to the docking problem.

5 July 2018

1 reference

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The biophysics of ligand-receptor interactions

5 July 2018

1 reference

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The interpretation of protein structures: Estimation of static accessibility

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300098

Diffusion-controlled macromolecular interactions

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300098

Computer simulations of the diffusion of a substrate to an active site of an enzyme.

5 July 2018

1 reference

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On the specificity of DNA-protein interactions

5 July 2018

1 reference

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Quantitative evaluation of the contribution of ionic interactions to the formation of the thrombin-hirudin complex.

5 July 2018

1 reference

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Facilitated target location in biological systems

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300098

On the attribution of binding energy in antigen-antibody complexes McPC 603, D1.3, and HyHEL-5.

5 July 2018

1 reference

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Automated docking of substrates to proteins by simulated annealing

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300098

Dominant forces in protein folding

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300098

Electrostatic interactions in macromolecules: theory and applications

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300098

Protein docking and complementarity

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300098

Kinetics of protein-protein association explained by Brownian dynamics computer simulation

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300098

Calculation of the free energy of association for protein complexes

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300098

Computer analysis of protein-protein interaction

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300098

The kinetics of protein-protein recognition.

5 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1300098

Protein-protein interactions in colicin E9 DNase-immunity protein complexes. 1. Diffusion-controlled association and femtomolar binding for the cognate complex.

28 October 2018

1 reference

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CHARMM: A program for macromolecular energy, minimization, and dynamics calculations

28 October 2018

1 reference

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Entropic Barriers, Frustration, and Order: Basic Ingredients in Protein Folding

7 January 2021

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7 January 2021

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Rapid, electrostatically assisted association of proteins

7 January 2021

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Production and subsequent second-order decomposition of protein disulfide anions lengthy collisions between proteins

7 January 2021

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Effect of Conformational Flexibility and Solvation on Receptor-Ligand Binding Free Energies

7 January 2021

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The stability of hydrogen-bonded peptide structures in aqueous solution

7 January 2021

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/10049302

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/S0006-3495(99)77281-4

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:10049302%20AND%20SRC:MED&resulttype=core&format=json

11 November 2019

1 reference

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11 November 2019

PubMed publication ID

10049302

1 reference