HIV-1 subtype distribution in the Gambia and the significant presence of CRF49_cpx, a novel circulating recombinant form (Q34243456)

31 July 2017

title

HIV-1 subtype distribution in the Gambia and the significant presence of CRF49_cpx, a novel circulating recombinant form (English)

1 reference

31 July 2017

0 references

3

1 reference

31 July 2017

Brian Foley

8

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Matthew Cotten

object named as

Matthew Cotten

11

0 references

Thushan I de Silva

object named as

Thushan I de Silva

1

0 references

Clayton O. Onyango

6

object named as

Clayton Onyango

1 reference

31 July 2017

10

Sarah L Rowland-Jones

1 reference

31 July 2017

9

Hilton Whittle

1 reference

31 July 2017

7

Assan Jaye

1 reference

31 July 2017

5

Carla van Tienen

1 reference

31 July 2017

Roxanne Turner

2

1 reference

31 July 2017

Roochi Trikha

4

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31 July 2017

publication date

9 October 2010

1 reference

31 July 2017

1 reference

31 July 2017

volume

7

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31 July 2017

page(s)

82

1 reference

The role of recombination in the emergence of a complex and dynamic HIV epidemic

31 July 2017

cites work

1 reference

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6 July 2018

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Mosaic HIV-1 vaccines expand the breadth and depth of cellular immune responses in rhesus monkeys

6 July 2018

1 reference

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6 July 2018

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CCR5- and CXCR4-tropic subtype C human immunodeficiency virus type 1 isolates have a lower level of pathogenic fitness than other dominant group M subtypes: implications for the epidemic

6 July 2018

1 reference

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Effect of human immunodeficiency virus Type 1 (HIV-1) subtype on disease progression in persons from Rakai, Uganda, with incident HIV-1 infection

6 July 2018

1 reference

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Deciphering human immunodeficiency virus type 1 transmission and early envelope diversification by single-genome amplification and sequencing

6 July 2018

1 reference

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6 July 2018

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Recombination confounds the early evolutionary history of human immunodeficiency virus type 1: subtype G is a circulating recombinant form

6 July 2018

1 reference

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The predominance of Human Immunodeficiency Virus type 1 (HIV-1) circulating recombinant form 02 (CRF02_AG) in West Central Africa may be related to its replicative fitness

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2964586

Comprehensive cross-clade neutralization analysis of a panel of anti-human immunodeficiency virus type 1 monoclonal antibodies

6 July 2018

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Molecular epidemiology of human immunodeficiency virus type 1 sub-subtype A3 in Senegal from 1988 to 2001.

6 July 2018

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Distinct human immunodeficiency virus type 1 subtype A virus circulating in West Africa: sub-subtype A3.

6 July 2018

1 reference

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Regional differences in HIV trends in The Gambia: results from sentinel surveillance among pregnant women

6 July 2018

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Effect of human immunodeficiency virus (HIV) type 1 envelope subtypes A and D on disease progression in a large cohort of HIV-1-positive persons in Uganda

6 July 2018

1 reference

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MRBAYES: Bayesian inference of phylogenetic trees

6 July 2018

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Study of HIV type 1 gag/env variability in The Gambia, using a multiplex DNA polymerase chain reaction

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2964586

Unprecedented degree of human immunodeficiency virus type 1 (HIV-1) group M genetic diversity in the Democratic Republic of Congo suggests that the HIV-1 pandemic originated in Central Africa.

6 July 2018

1 reference

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HIV type 1 A/J recombinant with a pronounced pol gene mosaicism

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2964586

Characterization of V3 sequence heterogeneity in subtype C human immunodeficiency virus type 1 isolates from Malawi: underrepresentation of X4 variants.

6 July 2018

1 reference

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Full-length human immunodeficiency virus type 1 genomes from subtype C-infected seroconverters in India, with evidence of intersubtype recombination

6 July 2018

1 reference

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Human immunodeficiency virus type 1 subtypes differ in disease progression

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2964586

Full genome sequences of human immunodeficiency virus type 1 subtypes G and A/G intersubtype recombinants

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2964586

Differences in chemokine coreceptor usage between genetic subtypes of HIV-1.

6 July 2018

1 reference

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Maximum-likelihood estimation of evolutionary trees from continuous characters

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2964586

Comparative performance of the REGA subtyping tool version 2 versus version 1.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2964586

Signature nucleotide polymorphisms at positions 64 and 65 in reverse transcriptase favor the selection of the K65R resistance mutation in HIV-1 subtype C.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2964586

Surprisingly high prevalence of subtype C and specific HIV-1 subtype/CRF distribution in men having sex with men in Senegal

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2964586

Twenty years of prospective molecular epidemiology in Senegal: changes in HIV diversity

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2964586

Sixteen years of HIV surveillance in a West African research clinic reveals divergent epidemic trends of HIV-1 and HIV-2.

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2964586

No difference in clinical progression between patients infected with the predominant human immunodeficiency virus type 1 circulating recombinant form (CRF) 02_AG strain and patients not infected with CRF02_AG, in Western and West-Central Africa: a f

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2964586

Complex mosaic structure of the partial envelope sequence from a Gambian HIV type 1 isolate

28 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2964586

Estimating the pattern of nucleotide substitution

28 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20932333

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The sequence manipulation suite: JavaScript programs for analyzing and formatting protein and DNA sequences

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20932333

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

HIV-1 subtype D infection is associated with faster disease progression than subtype A in spite of similar plasma HIV-1 loads

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20932333

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1742-4690-7-82

1 reference

Dimensions Publication ID

31 July 2017

0 references

1 reference

31 July 2017

1 reference