Making sense of G‐quadruplex and i‐motif functions in oncogene promoters (Q34271763)

1 August 2017

1 reference

title

Making sense of G-quadruplex and i-motif functions in oncogene promoters (English)

1 reference

1 August 2017

Making sense of G‐quadruplex and i‐motif functions in oncogene promoters (English)

1 reference

https://api.crossref.org/works/10.1111/J.1742-4658.2010.07759.X

13 June 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20670278

13 June 2024

promoter

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20670278

13 June 2024

author name string

Samantha Kendrick

series ordinal

2

1 reference

1 August 2017

Laurence Hurley

series ordinal

3

1 reference

1 August 2017

Tracy A. Brooks

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20670278

13 June 2024

language of work or name

English

0 references

publication date

29 July 2010

1 reference

full work available at URL

1 August 2017

https://europepmc.org/articles/pmc2971675?pdf=render

file format

Portable Document Format

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20670278

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20670278/?tool=EBI

13 June 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20670278

https://www.ncbi.nlm.nih.gov/pmc/articles/pmid/20670278/pdf/?tool=EBI

13 June 2024

file format

Portable Document Format

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20670278

https://europepmc.org/articles/PMC2971675

13 June 2024

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20670278

https://europepmc.org/articles/PMC2971675?pdf=render

13 June 2024

file format

Portable Document Format

online access status

open access

content deliverer

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20670278

https://doi.org/10.1111/j.1742-4658.2010.07759.x

13 June 2024

online access status

open access

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?resulttype=core&format=json&query=SRC%3AMED%20AND%20EXT_ID%3A20670278

https://api.wiley.com/onlinelibrary/tdm/v1/articles/10.1111%2Fj.1742-4658.2010.07759.x

13 June 2024

1 reference

https://api.crossref.org/works/10.1111/J.1742-4658.2010.07759.X

https://febs.onlinelibrary.wiley.com/doi/pdf/10.1111/j.1742-4658.2010.07759.x

13 June 2024

1 reference

https://api.crossref.org/works/10.1111/J.1742-4658.2010.07759.X

13 June 2024

1 reference

1 August 2017

volume

277

1 reference

1 August 2017

issue

17

1 reference

1 August 2017

page(s)

3459-3469

1 reference

Structure, location and interactions of G‐quadruplexes

1 August 2017

cites work

1 reference

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G‐quadruplex nucleic acids and human disease

6 July 2018

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Molecular cloning of the human platelet-derived growth factor receptor beta (PDGFR-beta) promoter and drug targeting of the G-quadruplex-forming region to repress PDGFR-beta expression

6 July 2018

1 reference

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Altered gene expression in the Werner and Bloom syndromes is associated with sequences having G-quadruplex forming potential

6 July 2018

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Human telomeric G-quadruplex: thermodynamic and kinetic studies of telomeric quadruplex stability.

6 July 2018

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Human telomeric G-quadruplex: the current status of telomeric G-quadruplexes as therapeutic targets in human cancer

6 July 2018

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Human telomeric G-quadruplex: structures of DNA and RNA sequences

6 July 2018

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The c-MYC NHE III(1): function and regulation

6 July 2018

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DNA loop sequence as the determinant for chiral supramolecular compound G-quadruplex selectivity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

The i-motif in the bcl-2 P1 promoter forms an unexpectedly stable structure with a unique 8:5:7 loop folding pattern

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

The role of supercoiling in transcriptional control of MYC and its importance in molecular therapeutics

6 July 2018

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Genome-wide analysis of a G-quadruplex-specific single-chain antibody that regulates gene expression

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

A G-Rich Sequence within the c-kit Oncogene Promoter Forms a Parallel G-Quadruplex Having Asymmetric G-Tetrad Dynamics

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

Formation of a unique end-to-end stacked pair of G-quadruplexes in the hTERT core promoter with implications for inhibition of telomerase by G-quadruplex-interactive ligands

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

Identification and characterization of nucleolin as a c-myc G-quadruplex-binding protein

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

The structures of quadruplex nucleic acids and their drug complexes

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

Targeting human gastrointestinal stromal tumor cells with a quadruplex-binding small molecule.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

NM23-H2 may play an indirect role in transcriptional activation of c-myc gene expression but does not cleave the nuclease hypersensitive element III1

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

The importance of negative superhelicity in inducing the formation of G-quadruplex and i-motif structures in the c-Myc promoter: implications for drug targeting and control of gene expression

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

pH-dependent structures of an i-motif DNA in solution

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

Stabilisation of G-quadruplex DNA by small molecules

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

Structures, folding patterns, and functions of intramolecular DNA G-quadruplexes found in eukaryotic promoter regions

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

A novel G-quadruplex-forming GGA repeat region in the c-myb promoter is a critical regulator of promoter activity

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

Genomic distribution and functional analyses of potential G-quadruplex-forming sequences in Saccharomyces cerevisiae.

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

Sequence occurrence and structural uniqueness of a G-quadruplex in the human c-kit promoter

6 July 2018

1 reference

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Structure of an Unprecedented G-Quadruplex Scaffold in the Human c-kit Promoter

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

G-quadruplexes in promoters throughout the human genome

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

Deconvoluting the structural and drug-recognition complexity of the G-quadruplex-forming region upstream of the bcl-2 P1 promoter

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

An intramolecular G-quadruplex structure with mixed parallel/antiparallel G-strands formed in the human BCL-2 promoter region in solution

6 July 2018

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DNA supercoiling - a global transcriptional regulator for enterobacterial growth?

6 July 2018

1 reference

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Topological domain structure of the Escherichia coli chromosome

6 July 2018

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Catalysis of DNA cleavage and nucleoside triphosphate synthesis by NM23-H2/NDP kinase share an active site that implies a DNA repair function

6 July 2018

1 reference

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6 July 2018

The Hallmarks of Cancer

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Single strand DNA specificity analysis of human nucleoside diphosphate kinase B.

6 July 2018

1 reference

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The WT1 protein is a negative regulator of the normal bcl-2 allele in t(14;18) lymphomas

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

Human c-myc transcription factor PuF identified as nm23-H2 nucleoside diphosphate kinase, a candidate suppressor of tumor metastasis

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

Alternative promoters and exons, somatic mutation and deregulation of the Bcl-2-Ig fusion gene in lymphoma

6 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2971675

Genome-wide computational and expression analyses reveal G-quadruplex DNA motifs as conserved cis-regulatory elements in human and related species.

6 July 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2010.07759.X

Gene function correlates with potential for G4 DNA formation in the human genome

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2010.07759.X

Trisubstituted isoalloxazines as a new class of G-quadruplex binding ligands: small molecule regulation of c-kit oncogene expression

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2010.07759.X

The functional response of upstream DNA to dynamic supercoiling in vivo

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2010.07759.X

Unusual DNA structure of the diabetes susceptibility locus IDDM2 and its effect on transcription by the insulin promoter factor Pur-1/MAZ.

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2010.07759.X

The KRAS promoter responds to Myc-associated zinc finger and poly(ADP-ribose) polymerase 1 proteins, which recognize a critical quadruplex-forming GA-element

21 January 2018

1 reference

https://api.crossref.org/works/10.1111%2FJ.1742-4658.2010.07759.X

Cleavage of DNA by human NM23-H2/nucleoside diphosphate kinase involves formation of a covalent protein-DNA complex

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20670278

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The dynamic character of the G-quadruplex element in the c-MYC promoter and modification by TMPyP4

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20670278

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

1 reference

1 August 2017

1 reference

1 August 2017

1 reference