Non-coding RNA networks underlying cognitive disorders across the lifespan (Q35046517)

6 August 2017

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title

Non-coding RNA networks underlying cognitive disorders across the lifespan (English)

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6 August 2017

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1 reference

Irfan A Qureshi

1

1 reference

6 August 2017

Mark F Mehler

series ordinal

2

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6 August 2017

publication date

15 March 2011

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Trends in Molecular Medicine

6 August 2017

published in

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6 August 2017

volume

17

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6 August 2017

issue

6

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6 August 2017

page(s)

337-346

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The majority of total nuclear-encoded non-ribosomal RNA in a human cell is 'dark matter' un-annotated RNA

6 August 2017

cites work

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8 July 2018

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REST and CoREST are transcriptional and epigenetic regulators of seminal neural fate decisions

8 July 2018

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L1 retrotransposition in neurons is modulated by MeCP2

8 July 2018

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Transposable element insertions have strongly affected human evolution

8 July 2018

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When neurogenesis encounters aging and disease

8 July 2018

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17A, a novel non-coding RNA, regulates GABA B alternative splicing and signaling in response to inflammatory stimuli and in Alzheimer disease

8 July 2018

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Long noncoding RNAs with enhancer-like function in human cells

8 July 2018

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Functional MicroRNA Is Transferred between Glioma Cells

8 July 2018

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The Nuclear-Retained Noncoding RNA MALAT1 Regulates Alternative Splicing by Modulating SR Splicing Factor Phosphorylation

8 July 2018

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The X as model for RNA's niche in epigenomic regulation

8 July 2018

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A long nuclear-retained non-coding RNA regulates synaptogenesis by modulating gene expression

8 July 2018

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A large intergenic noncoding RNA induced by p53 mediates global gene repression in the p53 response

8 July 2018

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New class of gene-termini-associated human RNAs suggests a novel RNA copying mechanism

8 July 2018

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The widespread regulation of microRNA biogenesis, function and decay

8 July 2018

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Nuclear-localized tiny RNAs are associated with transcription initiation and splice sites in metazoans.

8 July 2018

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A novel pathway regulates memory and plasticity via SIRT1 and miR-134

8 July 2018

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Sex-specific parent-of-origin allelic expression in the mouse brain

8 July 2018

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High-resolution analysis of parent-of-origin allelic expression in the mouse brain

8 July 2018

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A myriad of miRNA variants in control and Huntington's disease brain regions detected by massively parallel sequencing

8 July 2018

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Identification and quantitative analyses of microRNAs located in the distal axons of sympathetic neurons

8 July 2018

1 reference

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Neuronal microRNA deregulation in response to Alzheimer's disease amyloid-beta

8 July 2018

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8 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Most "dark matter" transcripts are associated with known genes

8 July 2018

1 reference

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Adult neurogenesis: integrating theories and separating functions.

8 July 2018

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MicroRNA-101 regulates amyloid precursor protein expression in hippocampal neurons

8 July 2018

1 reference

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Widespread transcription at neuronal activity-regulated enhancers

8 July 2018

1 reference

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Contrasts between adaptive coding and noncoding changes during human evolution

8 July 2018

1 reference

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Differential regulation of mature and precursor microRNA expression by NMDA and metabotropic glutamate receptor activation during LTP in the adult dentate gyrus in vivo

8 July 2018

1 reference

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MicroRNAs in neural cell differentiation

8 July 2018

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ADAR editing in double-stranded UTRs and other noncoding RNA sequences

8 July 2018

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Computational methodologies for studying non-coding RNAs relevant to central nervous system function and dysfunction

8 July 2018

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Long non-coding RNAs in nervous system function and disease

8 July 2018

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Disruption of the epigenetic code: an emerging mechanism in mental retardation

8 July 2018

1 reference

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Functions and regulation of RNA editing by ADAR deaminases

8 July 2018

1 reference

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Epigenetic mechanisms underlying human epileptic disorders and the process of epileptogenesis

8 July 2018

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Identifying co-regulating microRNA groups

8 July 2018

1 reference

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Human accelerated region 1 noncoding RNA is repressed by REST in Huntington's disease

8 July 2018

1 reference

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Epigenetic changes and non-coding expanded repeats

8 July 2018

1 reference

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RNA surveillance-an emerging role for RNA regulatory networks in aging

8 July 2018

1 reference

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Chromatin modifiers, cognitive disorders, and imprinted genes.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Long noncoding RNAs in neuronal-glial fate specification and oligodendrocyte lineage maturation

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Angiogenin-induced tRNA-derived stress-induced RNAs promote stress-induced stress granule assembly

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Microfluidic isolation and transcriptome analysis of serum microvesicles

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Senescent synapses and hippocampal circuit dynamics

8 July 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

RNA editing genes associated with extreme old age in humans and with lifespan in C. elegans

8 July 2018

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deepBase: a database for deeply annotating and mining deep sequencing data

8 July 2018

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8 July 2018

microRNAs at the synapse

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Cognitive decline in Alzheimer's disease is associated with selective changes in calcineurin/NFAT signaling.

8 July 2018

1 reference

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Genomic imprinting: employing and avoiding epigenetic processes

8 July 2018

1 reference

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Enhancing non-coding RNA information content with ADAR editing

8 July 2018

1 reference

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Genomic and transcriptional co-localization of protein-coding and long non-coding RNA pairs in the developing brain

8 July 2018

1 reference

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Regulation of non-coding RNA networks in the nervous system--what's the REST of the story?

8 July 2018

1 reference

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Macro role(s) of microRNAs in fragile X syndrome?

8 July 2018

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L1 retrotransposition in human neural progenitor cells

8 July 2018

1 reference

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Balanced gene regulation by an embryonic brain ncRNA is critical for adult hippocampal GABA circuitry

8 July 2018

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Evolution, biogenesis and function of promoter-associated RNAs

8 July 2018

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Regulation of mRNA transport and translation in axons

8 July 2018

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The genetic landscape of intellectual disability arising from chromosome X.

8 July 2018

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Genome-wide identification of human RNA editing sites by parallel DNA capturing and sequencing

8 July 2018

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Small RNAs derived from snoRNAs

8 July 2018

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Exosome complex and pervasive transcription in eukaryotic genomes

8 July 2018

1 reference

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RNA granules: post-transcriptional and epigenetic modulators of gene expression

8 July 2018

1 reference

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Dicer independent small RNAs associate with telomeric heterochromatin.

8 July 2018

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Common themes in siRNA-mediated epigenetic silencing pathways.

8 July 2018

1 reference

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ADAR1 and ADAR2 expression and editing activity during forebrain development.

8 July 2018

1 reference

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Translation regulation of mRNAs by the fragile X family of proteins through the microRNA pathway

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

RNA regulation of epigenetic processes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Expression and regulation of antiviral protein APOBEC3G in human neuronal cells

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Comparative analysis of argonaute-dependent small RNA pathways in Drosophila

8 July 2018

1 reference

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Glioblastoma microvesicles transport RNA and proteins that promote tumour growth and provide diagnostic biomarkers

8 July 2018

1 reference

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Noncoding RNAs in Long-Term Memory Formation

8 July 2018

1 reference

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Identification of dynamically regulated microRNA and mRNA networks in developing oligodendrocytes

8 July 2018

1 reference

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Epigenetic principles and mechanisms underlying nervous system functions in health and disease

8 July 2018

1 reference

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Local protein synthesis, actin dynamics, and LTP consolidation

8 July 2018

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Metaplasticity: new insights through electrophysiological investigations

8 July 2018

1 reference

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Endogenous small interfering RNAs in animals

8 July 2018

1 reference

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Physiological dysfunctions associated with mutations of the imprinted Gnas locus.

8 July 2018

1 reference

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Frequency and fate of microRNA editing in human brain

8 July 2018

1 reference

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The AID/APOBEC family of nucleic acid mutators.

8 July 2018

1 reference

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Expression of a noncoding RNA is elevated in Alzheimer's disease and drives rapid feed-forward regulation of beta-secretase

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Induced ncRNAs allosterically modify RNA-binding proteins in cis to inhibit transcription

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Prader-Willi phenotype caused by paternal deficiency for the HBII-85 C/D box small nucleolar RNA cluster

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Centrosomal RNA correlates with intron-poor nuclear genes in Spisula oocytes

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Loss of microRNA cluster miR-29a/b-1 in sporadic Alzheimer's disease correlates with increased BACE1/beta-secretase expression

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

RNA editing, DNA recoding and the evolution of human cognition

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

What are imprinted genes doing in the brain?

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

RNAs as extracellular signaling molecules

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Translational control by a small RNA: dendritic BC1 RNA targets the eukaryotic initiation factor 4A helicase mechanism

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

MicroRNAs and the advent of vertebrate morphological complexity

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Specific expression of long noncoding RNAs in the mouse brain

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Exosomal transfer of proteins and RNAs at synapses in the nervous system

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Mobile DNA elements in primate and human evolution

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Noncoding RNAs: couplers of analog and digital information in nervous system function?

8 July 2018

1 reference

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Noncoding RNAs and RNA editing in brain development, functional diversification, and neurological disease

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project

8 July 2018

1 reference

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Dendritic BC200 RNA in aging and in Alzheimer's disease

8 July 2018

1 reference

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RNA maps reveal new RNA classes and a possible function for pervasive transcription

8 July 2018

1 reference

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Comparative sequence analysis reveals an intricate network among REST, CREB and miRNA in mediating neuronal gene expression

8 July 2018

1 reference

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An RNA gene expressed during cortical development evolved rapidly in humans

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

RNA-mediated response to heat shock in mammalian cells

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

NFAT dysregulation by increased dosage of DSCR1 and DYRK1A on chromosome 21.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

A brain-specific microRNA regulates dendritic spine development

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

The snoRNA HBII-52 regulates alternative splicing of the serotonin receptor 2C

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

A strategy for probing the function of noncoding RNAs finds a repressor of NFAT

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Antisense transcription in the mammalian transcriptome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

The transcriptional landscape of the mammalian genome

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

RNA interference: a mammalian SID-1 homologue enhances siRNA uptake and gene silencing efficacy in human cells

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Imprinted gene expression in the brain

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Imprinted Nesp55 influences behavioral reactivity to novel environments

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Role of a neuronal small non-messenger RNA: behavioural alterations in BC1 RNA-deleted mice.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Transport of dsRNA into cells by the transmembrane protein SID-1.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Extracellular 'communicator RNA'.

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

MicroRNA loss enhances learning and memory in mice

8 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

A comparison between ribo-minus RNA-sequencing and polyA-selected RNA-sequencing

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

The prevalence of epigenetic mechanisms in the regulation of cognitive functions and behaviour

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Genome-wide analysis of miRNA expression reveals a potential role for miR-144 in brain aging and spinocerebellar ataxia pathogenesis

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Tiny RNAs associated with transcription start sites in animals.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Regulation of microRNA expression by induction of bidirectional synaptic plasticity

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

Epigenetic aberration of the human REELIN gene in psychiatric disorders

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

The relationship between non-protein-coding DNA and eukaryotic complexity.

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

The NRSE smRNA specifies the fate of adult hippocampal neural stem cells

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

RED2, a brain-specific member of the RNA-specific adenosine deaminase family

25 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115489

The locus coeruleus–noradrenergic system: modulation of behavioral state and state-dependent cognitive processes

25 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/21411369

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1016/J.MOLMED.2011.02.002

1 reference

6 August 2017

1 reference

6 August 2017

1 reference