mrsFAST: a cache-oblivious algorithm for short-read mapping. (Q35047218)

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English	mrsFAST: a cache-oblivious algorithm for short-read mapping.	scientific article

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Europe PubMed Central

PMC publication ID

3115707

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

retrieved

9 February 2020

title

mrsFAST: a cache-oblivious algorithm for short-read mapping (English)

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Europe PubMed Central

PMC publication ID

3115707

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

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9 February 2020

author

Can Alkan

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3

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Europe PubMed Central

PMC publication ID

3115707

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

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9 February 2020

Inanc Birol

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5

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Europe PubMed Central

PMC publication ID

3115707

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

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9 February 2020

Evan E. Eichler

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6

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Evan E Eichler

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Europe PubMed Central

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3115707

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

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9 February 2020

S. Cenk Sahinalp

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7

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S Cenk Sahinalp

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Europe PubMed Central

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3115707

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

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9 February 2020

Fereydoun Hormozdiari

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2

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Fereydoun Hormozdiari

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Europe PubMed Central

PMC publication ID

3115707

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

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9 February 2020

author name string

Faraz Hach

series ordinal

1

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Europe PubMed Central

PMC publication ID

3115707

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

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9 February 2020

Farhad Hormozdiari

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4

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Europe PubMed Central

PMC publication ID

3115707

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

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9 February 2020

publication date

1 August 2010

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Europe PubMed Central

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3115707

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

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9 February 2020

published in

Nature Methods

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stated in

Europe PubMed Central

PMC publication ID

3115707

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

retrieved

9 February 2020

volume

7

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Europe PubMed Central

PMC publication ID

3115707

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

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9 February 2020

issue

8

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Europe PubMed Central

PMC publication ID

3115707

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

retrieved

9 February 2020

page(s)

576-577

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Europe PubMed Central

PMC publication ID

3115707

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

retrieved

9 February 2020

cites work

Personalized copy number and segmental duplication maps using next-generation sequencing.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115707

retrieved

8 July 2018

RazerS--fast read mapping with sensitivity control

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115707

retrieved

8 July 2018

Fast and accurate short read alignment with Burrows-Wheeler transform

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115707

retrieved

8 July 2018

Combinatorial algorithms for structural variation detection in high-throughput sequenced genomes

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115707

retrieved

8 July 2018

Ultrafast and memory-efficient alignment of short DNA sequences to the human genome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115707

retrieved

8 July 2018

Mapping short DNA sequencing reads and calling variants using mapping quality scores

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=3115707

retrieved

8 July 2018

Identifiers

DOI

10.1038/NMETH0810-576

1 reference

stated in

Europe PubMed Central

PMC publication ID

3115707

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

retrieved

9 February 2020

PMC publication ID

3115707

1 reference

stated in

Europe PubMed Central

PMC publication ID

3115707

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

retrieved

9 February 2020

PubMed publication ID

20676076

1 reference

stated in

Europe PubMed Central

PMC publication ID

3115707

reference URL

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:20676076%20AND%20SRC:MED&resulttype=core&format=json

retrieved

9 February 2020

ResearchGate publication ID

45440929

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