HMMER web server: 2015 update (Q35622751)

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scientific article published on 5 May 2015

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Language	Label	Description	Also known as
English	HMMER web server: 2015 update	scientific article published on 5 May 2015

Statements

instance of

scholarly article

1 reference

stated in

Europe PubMed Central

PubMed publication ID

25943547

retrieved

9 August 2017

title

HMMER web server: 2015 update (English)

1 reference

stated in

Europe PubMed Central

PubMed publication ID

25943547

retrieved

9 August 2017

main subject

web server

1 reference

based on heuristic

inferred from title

author

Alex Bateman

series ordinal

7

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stated in

Europe PubMed Central

PubMed publication ID

25943547

retrieved

9 August 2017

Sean Eddy

series ordinal

8

1 reference

stated in

Europe PubMed Central

PubMed publication ID

25943547

retrieved

9 August 2017

Jody Clements

series ordinal

2

object named as

Jody Clements

0 references

Robert D. Finn

object named as

Robert D Finn

series ordinal

1

0 references

Travis J. Wheeler

object named as

Travis J Wheeler

series ordinal

5

0 references

author name string

William Arndt

series ordinal

3

1 reference

stated in

Europe PubMed Central

PubMed publication ID

25943547

retrieved

9 August 2017

Benjamin L Miller

series ordinal

4

1 reference

stated in

Europe PubMed Central

PubMed publication ID

25943547

retrieved

9 August 2017

Fabian Schreiber

series ordinal

6

1 reference

stated in

Europe PubMed Central

PubMed publication ID

25943547

retrieved

9 August 2017

language of work or name

English

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publication date

5 May 2015

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stated in

Europe PubMed Central

PubMed publication ID

25943547

retrieved

9 August 2017

published in

Nucleic Acids Research

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stated in

Europe PubMed Central

PubMed publication ID

25943547

retrieved

9 August 2017

volume

43

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stated in

Europe PubMed Central

PubMed publication ID

25943547

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9 August 2017

issue

W1

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stated in

Europe PubMed Central

PubMed publication ID

25943547

retrieved

9 August 2017

page(s)

W30-8

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stated in

Europe PubMed Central

PubMed publication ID

25943547

retrieved

9 August 2017

copyright license

Creative Commons Attribution 4.0 International

start time

11 November 2016

1 reference

stated in

April 2022 Public Data File from Crossref

copyright status

copyrighted

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cites work

The RCSB Protein Data Bank: views of structural biology for basic and applied research and education

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

The SUPERFAMILY 1.75 database in 2014: a doubling of data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

CATH: comprehensive structural and functional annotations for genome sequences.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

UniProt: a hub for protein information

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

PDBe: Protein Data Bank in Europe

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

Pfam: the protein families database

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

TIGRFAMs and Genome Properties in 2013.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

Accelerated Profile HMM Searches

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

HMMER web server: interactive sequence similarity searching

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

Representative proteomes: a stable, scalable and unbiased proteome set for sequence analysis and functional annotation.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

Hidden Markov model speed heuristic and iterative HMM search procedure

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

The worldwide Protein Data Bank (wwPDB): ensuring a single, uniform archive of PDB data

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

IUPred: web server for the prediction of intrinsically unstructured regions of proteins based on estimated energy content

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

A combined transmembrane topology and signal peptide prediction method

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

PIRSF: family classification system at the Protein Information Resource

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

Profile hidden Markov models

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

Hidden Markov models in computational biology. Applications to protein modeling

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

Amino acid substitution matrices from an information theoretic perspective

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

Predicting coiled coils from protein sequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

Amino acid substitution matrices from protein blocks

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

12 July 2018

Identifying Protein Domains with the Pfam Database

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

25 September 2018

The pairwise energy content estimated from amino acid composition discriminates between folded and intrinsically unstructured proteins.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

25 September 2018

Database resources of the National Center for Biotechnology Information

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4489315

retrieved

25 September 2018

Identifiers

DOI

10.1093/NAR/GKV397

1 reference

stated in

Europe PubMed Central

PubMed publication ID

25943547

retrieved

9 August 2017

DBLP publication ID

journals/nar/FinnCAMWSBE15

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

PMC publication ID

4489315

1 reference

stated in

Europe PubMed Central

PubMed publication ID

25943547

retrieved

9 August 2017

PubMed publication ID

25943547

1 reference

stated in

Europe PubMed Central

PubMed publication ID

25943547

retrieved

9 August 2017

ResearchGate publication ID

276072855

0 references

Semantic Scholar paper ID

616f10f49dab1bbf9aa01a532d19527a3f70bafc

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