Kinetics of internal-loop formation in polypeptide chains: a simulation study (Q35781230)

10 August 2017

title

Kinetics of internal-loop formation in polypeptide chains: a simulation study (English)

1 reference

10 August 2017

2

Adrian Roitberg

1 reference

10 August 2017

Dana Doucet

1

1 reference

10 August 2017

Stephen J Hagen

series ordinal

3

1 reference

10 August 2017

language of work or name

English

0 references

publication date

5 January 2007

1 reference

10 August 2017

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10 August 2017

volume

92

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10 August 2017

issue

7

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10 August 2017

page(s)

2281-2289

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Effects of denaturants on the dynamics of loop formation in polypeptides

10 August 2017

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Evaluation of the distribution of distances between energy donors and acceptors by fluorescence decay

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

The protein folding 'speed limit'.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Polymer models of protein stability, folding, and interactions.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Rate of intrachain contact formation in an unfolded protein: temperature and denaturant effects

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Fast kinetics and mechanisms in protein folding

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Measuring the rate of intramolecular contact formation in polypeptides

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

The speed limit for protein folding measured by triplet-triplet energy transfer.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Diffusion-limited contact formation in unfolded cytochrome c: estimating the maximum rate of protein folding

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Fast events in protein folding initiated by nanosecond laser photolysis

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Theoretical predictions of folding pathways by using the proximity rule, with applications to bovine pancreatic trypsin inhibitor

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Distribution of end-to-end distances of oligopeptides in solution as estimated by energy transfer

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Kinetics of interior loop formation in semiflexible chains.

12 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Tertiary contact formation in alpha-synuclein probed by electron transfer.

25 September 2018

1 reference

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Dynamics of unfolded polypeptide chains as model for the earliest steps in protein folding.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Measurement of submicrosecond intramolecular contact formation in peptides at the single-molecule level

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Cyclization of a polymer: first-passage problem for a non-Markovian process.

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Peptide loop-closure kinetics from microsecond molecular dynamics simulations in explicit solvent

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

A fluorescence-based method for direct measurement of submicrosecond intramolecular contact formation in biopolymers: an exploratory study with polypeptides

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

The molecular elasticity of the extracellular matrix protein tenascin

25 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=1864833

Submillisecond kinetics of protein folding

25 September 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17208979

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Dynamics of chain closure: approximate treatment of nonlocal interactions

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17208979

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Reversible unfolding of individual titin immunoglobulin domains by AFM

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/17208979

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1529/BIOPHYSJ.106.092379

1 reference

10 August 2017

1 reference

10 August 2017

1 reference