Genome triplication drove the diversification of Brassica plants (Q36130900)

12 August 2017

Genome triplication drove the diversification of Brassica plants (English)

1 reference

12 August 2017

Feng Cheng

1

1 reference

12 August 2017

Jian Wu

series ordinal

2

1 reference

12 August 2017

Xiaowu Wang

series ordinal

3

1 reference

12 August 2017

language of work or name

1 reference

21 May 2014

1 reference

12 August 2017

Horticulture research

1 reference

12 August 2017

1

1 reference

12 August 2017

14024

1 reference

Creative Commons Attribution-NonCommercial-NoDerivs 3.0 Unported

12 August 2017

start time

21 May 2014

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

0 references

cites work

The Brassica oleracea genome reveals the asymmetrical evolution of polyploid genomes

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Origin, inheritance, and gene regulatory consequences of genome dominance in polyploids

2 October 2017

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Genome-wide identification, phylogeny, duplication, and expression analyses of two-component system genes in Chinese cabbage (Brassica rapa ssp. pekinensis).

2 October 2017

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Genome-wide identification, phylogeny, evolution and expression patterns of AP2/ERF genes and cytokinin response factors in Brassica rapa ssp. pekinensis

2 October 2017

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Physiological and genetic analysis of CO2-induced breakdown of self-incompatibility in Brassica rapa

2 October 2017

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The Brassica rapa FLC homologue FLC2 is a key regulator of flowering time, identified through transcriptional co-expression networks

2 October 2017

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Genome-wide analysis of the AP2/ERF transcription factor superfamily in Chinese cabbage (Brassica rapa ssp. pekinensis).

2 October 2017

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The Capsella rubella genome and the genomic consequences of rapid mating system evolution

2 October 2017

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Characterization of a new high copy Stowaway family MITE, BRAMI-1 in Brassica genome

2 October 2017

1 reference

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Genome-wide identification and analysis of the B3 superfamily of transcription factors in Brassicaceae and major crop plants

2 October 2017

1 reference

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Genome-wide characterization of the CBF/DREB1 gene family in Brassica rapa

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Syntenic gene analysis between Brassica rapa and other Brassicaceae species

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

A naturally occurring InDel variation in BraA.FLC.b (BrFLC2) associated with flowering time variation in Brassica rapa.

2 October 2017

1 reference

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Escape from preferential retention following repeated whole genome duplications in plants

2 October 2017

1 reference

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Biased gene fractionation and dominant gene expression among the subgenomes of Brassica rapa

2 October 2017

1 reference

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Altered patterns of fractionation and exon deletions in Brassica rapa support a two-step model of paleohexaploidy

2 October 2017

1 reference

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BRAD, the genetics and genomics database for Brassica plants

2 October 2017

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The genome of the mesopolyploid crop species Brassica rapa

2 October 2017

1 reference

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The genome of the extremophile crucifer Thellungiella parvula

2 October 2017

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HYL1 regulates the balance between adaxial and abaxial identity for leaf flattening via miRNA-mediated pathways

2 October 2017

1 reference

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The Arabidopsis lyrata genome sequence and the basis of rapid genome size change

2 October 2017

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Differentiation of the maize subgenomes by genome dominance and both ancient and ongoing gene loss

2 October 2017

1 reference

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Transposable elements and small RNAs contribute to gene expression divergence between Arabidopsis thaliana and Arabidopsis lyrata

2 October 2017

1 reference

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Dated molecular phylogenies indicate a Miocene origin for Arabidopsis thaliana

2 October 2017

1 reference

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Sequence and structure of Brassica rapa chromosome A3

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Following tetraploidy in maize, a short deletion mechanism removed genes preferentially from one of the two homologs.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Genome sequence of the palaeopolyploid soybean

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

The B73 Maize Genome: Complexity, Diversity, and Dynamics

2 October 2017

1 reference

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Complexity of genome evolution by segmental rearrangement in Brassica rapa revealed by sequence-level analysis

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Recent advances and emerging trends in plant hormone signalling

2 October 2017

1 reference

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Epigenetic silencing of transposable elements: a trade-off between reduced transposition and deleterious effects on neighboring gene expression

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Chromosomal phylogeny and karyotype evolution in x=7 crucifer species (Brassicaceae).

2 October 2017

1 reference

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Comparative mapping of Brassica juncea and Arabidopsis thaliana using Intron Polymorphism (IP) markers: homoeologous relationships, diversification and evolution of the A, B and C Brassica genomes

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

The ABC's of comparative genomics in the Brassicaceae: building blocks of crucifer genomes.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Mechanisms of chromosome number reduction in Arabidopsis thaliana and related Brassicaceae species.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Segmental structure of the Brassica napus genome based on comparative analysis with Arabidopsis thaliana

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Chromosome triplication found across the tribe Brassiceae.

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Cross-talk in plant hormone signalling: what Arabidopsis mutants are telling us

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Analysis of the genome sequence of the flowering plant Arabidopsis thaliana

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Genome-wide analysis of the GRAS gene family in Chinese cabbage (Brassica rapa ssp. pekinensis).

2 October 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Genome-wide identification, classification and expression analysis of the heat shock transcription factor family in Chinese cabbage

2 July 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Loss/retention and evolution of NBS-encoding genes upon whole genome triplication of Brassica rapa.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Diversification times among Brassica (Brassicaceae) crops suggest hybrid formation after 20 million years of divergence.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Chalcone synthase family genes have redundant roles in anthocyanin biosynthesis and in response to blue/UV-A light in turnip (Brassica rapa; Brassicaceae).

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Association of molecular markers derived from the BrCRTISO1 gene with prolycopene-enriched orange-colored leaves in Brassica rapa [corrected]..

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Deciphering the diploid ancestral genome of the Mesohexaploid Brassica rapa

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

The ARC1 E3 ligase gene is frequently deleted in self-compatible Brassicaceae species and has a conserved role in Arabidopsis lyrata self-pollen rejection.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Metabolic and evolutionary costs of herbivory defense: systems biology of glucosinolate synthesis.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Characterization of SOC1's central role in flowering by the identification of its upstream and downstream regulators.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Glucosinolate biosynthetic genes in Brassica rapa.

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Genome evolution among cruciferous plants: a lecture from the comparison of the genetic maps of three diploid species--Capsella rubella, Arabidopsis lyrata subsp. petraea, and A. thaliana

23 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4596316

Brassicaceae: Species checklist and database on CD-Rom

23 September 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FHORTRES.2014.24

Closing the gaps: phylogenetic relationships in the Brassicaceae based on DNA sequence data of nuclear ribosomal ITS region

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FHORTRES.2014.24

Genome redundancy and plasticity within ancient and recent Brassica crop species

21 January 2018

1 reference

Crossref

https://api.crossref.org/works/10.1038%2FHORTRES.2014.24

Genetic relationships within Brassica rapa as inferred from AFLP fingerprints

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26504539

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Preferential retention of circadian clock genes during diploidization following whole genome triplication in Brassica rapa

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/26504539

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1038/HORTRES.2014.24

1 reference

12 August 2017

1 reference

12 August 2017

PubMed publication ID

26504539

1 reference