Mapping of internal monophosphate 5' ends of Bacillus subtilis messenger RNAs and ribosomal RNAs in wild-type and ribonuclease-mutant strains (Q36817958)

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scientific article published on 15 February 2016

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English	Mapping of internal monophosphate 5' ends of Bacillus subtilis messenger RNAs and ribosomal RNAs in wild-type and ribonuclease-mutant strains	scientific article published on 15 February 2016

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scholarly article

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26883633%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

Mapping of internal monophosphate 5' ends of Bacillus subtilis messenger RNAs and ribosomal RNAs in wild-type and ribonuclease-mutant strains (English)

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8 March 2020

Bacillus subtilis

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2

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8 March 2020

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8 March 2020

David H Bechhofer

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David H Bechhofer

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8 March 2020

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Jeanne M DiChiara

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8 March 2020

Sabine Figaro

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8 March 2020

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15 February 2016

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8 March 2020

Nucleic Acids Research

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8 March 2020

44

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8 March 2020

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8 March 2020

3373-3389

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8 March 2020

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Creative Commons Attribution-NonCommercial 4.0 International

11 November 2016

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Small stable RNA maturation and turnover in Bacillus subtilis

1 reference

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29 September 2017

Global analysis of mRNA decay intermediates in Bacillus subtilis wild-type and polynucleotide phosphorylase-deletion strains.

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29 September 2017

The double-stranded transcriptome of Escherichia coli

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29 September 2017

RNase III: Genetics and function; structure and mechanism

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29 September 2017

Ribonuclease III mechanisms of double-stranded RNA cleavage

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29 September 2017

Nucleotide specificity in bacterial mRNA recycling

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4838370

29 September 2017

Specificity of RppH-dependent RNA degradation in Bacillus subtilis

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29 September 2017

Bacillus subtilis RNA deprotection enzyme RppH recognizes guanosine in the second position of its substrates

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29 September 2017

Multiple exoribonucleases catalyze maturation of the 3' terminus of 16S ribosomal RNA (rRNA).

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29 September 2017

Bacillus subtilis mutants with knockouts of the genes encoding ribonucleases RNase Y and RNase J1 are viable, with major defects in cell morphology, sporulation, and competence

1 reference

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29 September 2017

The essential function of B. subtilis RNase III is to silence foreign toxin genes

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29 September 2017

Conserved bacterial RNase YbeY plays key roles in 70S ribosome quality control and 16S rRNA maturation

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29 September 2017

Activation of tRNA maturation by downstream uracil residues in B. subtilis

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29 September 2017

Global regulatory functions of the Staphylococcus aureus endoribonuclease III in gene expression.

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29 September 2017

RNA degradation in Bacillus subtilis: an interplay of essential endo- and exoribonucleases

1 reference

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29 September 2017

Three essential ribonucleases-RNase Y, J1, and III-control the abundance of a majority of Bacillus subtilis mRNAs.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4838370

29 September 2017

RNA-Seq and RNA immunoprecipitation analyses of the transcriptome of Streptomyces coelicolor identify substrates for RNase III

1 reference

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29 September 2017

Condition-dependent transcriptome reveals high-level regulatory architecture in Bacillus subtilis

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Proline utilization by Bacillus subtilis: uptake and catabolism

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29 September 2017

Genome-wide antisense transcription drives mRNA processing in bacteria

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29 September 2017

Bacillus subtilis mRNA decay: new parts in the toolkit

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29 September 2017

An RNA pyrophosphohydrolase triggers 5'-exonucleolytic degradation of mRNA in Bacillus subtilis.

1 reference

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29 September 2017

Indirect repression by Bacillus subtilis CodY via displacement of the activator of the proline utilization operon

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29 September 2017

Analysis of Escherichia coli RNase E and RNase III activity in vivo using tiling microarrays

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29 September 2017

Role of Escherichia coli YbeY, a highly conserved protein, in rRNA processing

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4838370

29 September 2017

What is the role of RNase J in mRNA turnover?

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=4838370

29 September 2017

Construction of Parallel Analysis of RNA Ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome

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29 September 2017

Maturation and degradation of ribosomal RNA in bacteria

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29 September 2017

Poly(A)-assisted RNA decay and modulators of RNA stability

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29 September 2017

Inactivation of KsgA, a 16S rRNA methyltransferase, causes vigorous emergence of mutants with high-level kasugamycin resistance

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29 September 2017

UNAFold: software for nucleic acid folding and hybridization

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29 September 2017

Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends

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29 September 2017

Endogenous siRNA and miRNA targets identified by sequencing of the Arabidopsis degradome

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29 September 2017

Role of Bacillus subtilis RNase J1 endonuclease and 5'-exonuclease activities in trp leader RNA turnover.

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29 September 2017

Mini-III, an unusual member of the RNase III family of enzymes, catalyses 23S ribosomal RNA maturation in B. subtilis

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29 September 2017

Processing of Bacillus subtilis small cytoplasmic RNA: evidence for an additional endonuclease cleavage site

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29 September 2017

5'-to-3' exoribonuclease activity in bacteria: role of RNase J1 in rRNA maturation and 5' stability of mRNA

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29 September 2017

Lost in translation: the influence of ribosomes on bacterial mRNA decay

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29 September 2017

Addition of poly(A) and heteropolymeric 3' ends in Bacillus subtilis wild-type and polynucleotide phosphorylase-deficient strains

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29 September 2017

An alternative strategy for bacterial ribosome synthesis: Bacillus subtilis rRNA transcription regulation

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29 September 2017

Identification of the gene encoding the 5S ribosomal RNA maturase in Bacillus subtilis: mature 5S rRNA is dispensable for ribosome function

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29 September 2017

Competence in Bacillus subtilis is controlled by regulated proteolysis of a transcription factor

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29 September 2017

Bacillus subtilis RNase III gene: cloning, function of the gene in Escherichia coli, and construction of Bacillus subtilis strains with altered rnc loci

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29 September 2017

Polyadenylation of mRNA in prokaryotes

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29 September 2017

A dual role for the Bacillus subtilis glpD leader and the GlpP protein in the regulated expression of glpD: antitermination and control of mRNA stability

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Defining the enzyme binding domain of a ribonuclease III processing signal. Ethylation interference and hydroxyl radical footprinting using catalytically inactive RNase III mutants.

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29 September 2017

Autoregulation of RNase III operon by mRNA processing

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29 September 2017

The regulation of genetic competence in Bacillus subtilis

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E.coli polynucleotide phosphorylase expression is autoregulated through an RNase III-dependent mechanism

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Compilation of superlinker vectors

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29 September 2017

Autoregulation of AbsB (RNase III) expression in Streptomyces coelicolor by endoribonucleolytic cleavage of absB operon transcripts

1 reference

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29 September 2017

PcrA is an essential DNA helicase of Bacillus subtilis fulfilling functions both in repair and rolling-circle replication.

1 reference

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A small gene, designated comS, located within the coding region of the fourth amino acid-activation domain of srfA, is required for competence development in Bacillus subtilis

1 reference

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27 June 2018

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1 reference

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Escherichia coli ribonuclease III activity is downregulated by osmotic stress: consequences for the degradation of bdm mRNA in biofilm formation.

1 reference

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5 September 2018

Ribosomes initiating translation of the hbs mRNA protect it from 5'-to-3' exoribonucleolytic degradation by RNase J1.

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5 September 2018

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5 September 2018

Maturation of the 5' end of Bacillus subtilis 16S rRNA by the essential ribonuclease YkqC/RNase J1.

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5 September 2018

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5 September 2018

Substrate specificity of an RNase III-like activity from Bacillus subtilis.

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Bacillus subtilis RNAase III cleavage sites in phage SP82 early mRNA.

1 reference

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Initiation, attenuation and RNase III processing of transcripts from the Escherichia coli operon encoding ribosomal protein S15 and polynucleotide phosphorylase

1 reference

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12 December 2020

based on heuristic

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Endoribonuclease RNase III is essential in Bacillus subtilis

1 reference

https://pubmed.ncbi.nlm.nih.gov/26883633

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Effect of 5'-proximal elements on decay of a model mRNA in Bacillus subtilis

1 reference

https://pubmed.ncbi.nlm.nih.gov/26883633

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Exoribonuclease R in Pseudomonas syringae is essential for growth at low temperature and plays a novel role in the 3' end processing of 16 and 5 S ribosomal RNA

1 reference

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

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10.1093/NAR/GKW073

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https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:26883633%20AND%20SRC:MED&resulttype=core&format=json

8 March 2020

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Europe PubMed Central

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8 March 2020

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Europe PubMed Central

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8 March 2020

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