Simulation of genomes: a review. (Q37480771)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19440512%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

title

Simulation of genomes: a review (English)

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19440512%20AND%20SRC:MED&resulttype=core&format=json

Antonio Carvajal-Rodríguez

28 January 2020

author

series ordinal

1

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19440512%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

author name string

Antonio Carvajal-Rodríguez

series ordinal

1

1 reference

20 August 2017

1 May 2008

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19440512%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19440512%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

volume

9

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19440512%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

issue

3

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19440512%20AND%20SRC:MED&resulttype=core&format=json

28 January 2020

page(s)

155-159

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:19440512%20AND%20SRC:MED&resulttype=core&format=json

A second generation human haplotype map of over 3.1 million SNPs

28 January 2020

cites work

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

PAML 4: phylogenetic analysis by maximum likelihood

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Forward-time simulations of human populations with complex diseases

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Simulations provide support for the common disease-common variant hypothesis

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Fast "coalescent" simulation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Strong correlation between meiotic crossovers and haplotype structure in a 2.5-Mb region on the long arm of chromosome 21.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

A haplotype map of the human genome

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

CoaSim: a flexible environment for simulating genetic data under coalescent models

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

simuPOP: a forward-time population genetics simulation environment

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

The limits of theoretical population genetics

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Serial SimCoal: a population genetics model for data from multiple populations and points in time

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

SelSim: a program to simulate population genetic data with natural selection and recombination

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Meiotic recombination hot spots and human DNA diversity.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

The International HapMap Project

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Genealogical trees, coalescent theory and the analysis of genetic polymorphisms

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Generating samples under a Wright-Fisher neutral model of genetic variation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

SIMCOAL: a general coalescent program for the simulation of molecular data in interconnected populations with arbitrary demography

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Haplotype evolution and linkage disequilibrium: A simulation study

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Coalescing into the 21st century: An overview and prospects of coalescent theory

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Population dynamics of HIV-1 inferred from gene sequences.

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Seq-Gen: an application for the Monte Carlo simulation of DNA sequence evolution along phylogenetic trees

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Brief communication: the Thule migration: rejecting population histories using computer simulation

23 August 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Perfect simulation from nonneutral population genetic models: variable population size and population subdivision

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Calibrating a coalescent simulation of human genome sequence variation

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Mlcoalsim: multilocus coalescent simulations.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Sequence-level population simulations over large genomic regions

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Significant variation in haplotype block structure but conservation in tagSNP patterns among global populations

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Ancestral alleles and population origins: inferences depend on mutation rate

26 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

msHOT: modifying Hudson's ms simulator to incorporate crossover and gene conversion hotspots.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Positive selection versus demography: evolutionary inferences based on an unusual haplotype structure in Drosophila simulans.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

EASYPOP (version 1.7): a computer program for population genetics simulations.

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

GENOME: a rapid coalescent-based whole genome simulator

2 September 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2679650

Islands of linkage disequilibrium

3 December 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19440512

12 December 2020

inferred from PubMed ID database lookup

Haplotype block structures show significant variation among populations

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/19440512

12 December 2020

inferred from PubMed ID database lookup

Identifiers

DOI

10.2174/138920208784340759

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/yf2onfmlpvgwjdisgx5rprjr3u

30 July 2022

release_yf2onfmlpvgwjdisgx5rprjr3u

Fatcat ID

1 reference

Fatcat

https://api.fatcat.wiki/v0/release/yf2onfmlpvgwjdisgx5rprjr3u

30 July 2022

https://api.fatcat.wiki/v0/release/yf2onfmlpvgwjdisgx5rprjr3u

1 reference

30 July 2022

https://api.fatcat.wiki/v0/release/yf2onfmlpvgwjdisgx5rprjr3u

PubMed publication ID

1 reference

30 July 2022