Interactions of the KWK6 cationic peptide with short nucleic acid oligomers: demonstration of large Coulombic end effects on binding at 0.1-0.2 M salt (Q38339935)

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English	Interactions of the KWK6 cationic peptide with short nucleic acid oligomers: demonstration of large Coulombic end effects on binding at 0.1-0.2 M salt	scientific article

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scholarly article

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Interactions of the KWK6 cationic peptide with short nucleic acid oligomers: demonstration of large Coulombic end effects on binding at 0.1-0.2 M salt (English)

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

author name string

Jeff D Ballin

1

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Irina A Shkel

2

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Europe PubMed Central

PMC publication ID

2 September 2017

M Thomas Record

3

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Europe PubMed Central

PMC publication ID

2 September 2017

language of work or name

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publication date

17 June 2004

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Europe PubMed Central

PMC publication ID

2 September 2017

Nucleic Acids Research

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Europe PubMed Central

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2 September 2017

32

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Europe PubMed Central

PMC publication ID

2 September 2017

11

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

3271-3281

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

Effect of the number of nucleic acid oligomer charges on the salt dependence of stability (DeltaG 37degrees) and melting temperature (Tm): NLPB analysis of experimental data

1 reference

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Thermodynamics of aminoglycoside-rRNA recognition.

1 reference

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Sequence-specific and 3'-end selective single-strand DNA binding by the Oxytricha nova telomere end binding protein alpha subunit

1 reference

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RNA-protein interactions

1 reference

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Duplexes of 21-nucleotide RNAs mediate RNA interference in cultured mammalian cells

1 reference

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6 September 2017

Recent advances in RNA-protein recognition.

1 reference

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6 September 2017

The importance of coulombic end effects: experimental characterization of the effects of oligonucleotide flanking charges on the strength and salt dependence of oligocation (L8+) binding to single-stranded DNA oligomers

1 reference

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6 September 2017

Large electrostatic differences in the binding thermodynamics of a cationic peptide to oligomeric and polymeric DNA.

1 reference

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Co-operative binding of Escherichia coli SSB tetramers to single-stranded DNA in the (SSB)35 binding mode

1 reference

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Apparent heat capacity change accompanying a nonspecific protein-DNA interaction. Escherichia coli SSB tetramer binding to oligodeoxyadenylates

1 reference

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6 September 2017

Importance of coulombic end effects on cation accumulation near oligoelectrolyte B-DNA: a demonstration using 23Na NMR.

1 reference

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6 September 2017

Grand canonical Monte Carlo molecular and thermodynamic predictions of ion effects on binding of an oligocation (L8+) to the center of DNA oligomers

1 reference

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6 September 2017

Salt-nucleic acid interactions

1 reference

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6 September 2017

Spectroscopic Determination of Tryptophan and Tyrosine in Proteins*

1 reference

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6 September 2017

Monte Carlo description of oligoelectrolyte properties of DNA oligomers: range of the end effect and the approach of molecular and thermodynamic properties to the polyelectrolyte limits

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=443526

6 September 2017

Thermodynamic extent of counterion release upon binding oligolysines to single-stranded nucleic acids

1 reference

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Implications of ribozyme kinetics for targeting the cleavage of specific RNA molecules in vivo: more isn't always better

1 reference

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Cooperative and non-cooperative binding of large ligands to a finite one-dimensional lattice. A model for ligand-oligonucleotide interactions

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Theoretical aspects of DNA-protein interactions: co-operative and non-co-operative binding of large ligands to a one-dimensional homogeneous lattice.

1 reference

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23 June 2018

Nonspecific ligand-DNA equilibrium binding parameters determined by fluorescence methods.

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Ion effects on ligand-nucleic acid interactions

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31 August 2018

Pentalysine-deoxyribonucleic acid interactions: a model for the general effects of ion concentrations on the interactions of proteins with nucleic acids.

1 reference

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Protein-nucleic acid interactions. 3. Cation effect on binding strength and specificity

1 reference

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Protein-RNA recognition

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1 reference

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Thermodynamics of single-stranded RNA binding to oligolysines containing tryptophan

1 reference

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Importance of oligoelectrolyte end effects for the thermodynamics of conformational transitions of nucleic acid oligomers: A grand canonical Monte Carlo analysis

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Equilibrium dialysis studies of polyamine binding to DNA

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Identifiers

10.1093/NAR/GKH646

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Europe PubMed Central

PMC publication ID

2 September 2017

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24 November 2022

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PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

2 September 2017

PubMed publication ID

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Europe PubMed Central

PMC publication ID

2 September 2017

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