Poly(A)+ RNAs roam the cell nucleus and pass through speckle domains in transcriptionally active and inactive cells (Q38341895)

2 September 2017

Poly(A)+ RNAs roam the cell nucleus and pass through speckle domains in transcriptionally active and inactive cells (English)

1 reference

2 September 2017

Chris Molenaar

1

1 reference

2 September 2017

Abadir Abdulle

2

1 reference

2 September 2017

Aarti Gena

3

1 reference

2 September 2017

Hans J Tanke

4

1 reference

2 September 2017

Roeland W Dirks

5

1 reference

2 September 2017

language of work or name

English

0 references

publication date

1 April 2004

1 reference

2 September 2017

Journal of Cell Biology

1 reference

2 September 2017

165

1 reference

2 September 2017

2

1 reference

2 September 2017

191-202

1 reference

Clustering of multiple specific genes and gene-rich R-bands around SC-35 domains: evidence for local euchromatic neighborhoods

2 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Nuclear speckles: a model for nuclear organelles

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Maintenance of stable heterochromatin domains by dynamic HP1 binding

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Modulation of heterochromatin protein 1 dynamics in primary Mammalian cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

TREX is a conserved complex coupling transcription with messenger RNA export

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Kinetics of HCMV immediate early mRNA expression in stably transfected fibroblasts

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Pre-mRNA splicing and mRNA export linked by direct interactions between UAP56 and Aly

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Linear 2' O-Methyl RNA probes for the visualization of RNA in living cells.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Messenger RNAs are recruited for nuclear export during transcription

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Prespliceosomal assembly on microinjected precursor mRNA takes place in nuclear speckles

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

The protein Aly links pre-messenger-RNA splicing to nuclear export in metazoans

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Tracking COL1A1 RNA in osteogenesis imperfecta. splice-defective transcripts initiate transport from the gene but are retained within the SC35 domain

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Deciphering the cellular pathway for transport of poly(A)-binding protein II

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Nuclear pre-mRNA compartmentalization: trafficking of released transcripts to splicing factor reservoirs

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Splicing is required for rapid and efficient mRNA export in metazoans

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Three-dimensional visualization of transcription sites and their association with splicing factor-rich nuclear speckles

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

The intranuclear movement of Balbiani ring premessenger ribonucleoprotein particles

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

The Mex67p-mediated nuclear mRNA export pathway is conserved from yeast to human

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Movement of nuclear poly(A) RNA throughout the interchromatin space in living cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Processing of endogenous pre-mRNAs in association with SC-35 domains is gene specific

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

RNA polymerase II localizes at sites of human cytomegalovirus immediate-early RNA synthesis and processing

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Ultrastructural analysis of transcription and splicing in the cell nucleus after bromo-UTP microinjection

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Intranuclear diffusion and hybridization state of oligonucleotides measured by fluorescence correlation spectroscopy in living cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

The dynamics of a pre-mRNA splicing factor in living cells

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Targeting of U2AF65 to sites of active splicing in the nucleus

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Intron-dependent recruitment of pre-mRNA splicing factors to sites of transcription

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Nonrandom gene organization: structural arrangements of specific pre-mRNA transcription and splicing with SC-35 domains

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Evidence for channeled diffusion of pre-mRNAs during nuclear RNA transport in metazoans

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

The human dystrophin gene requires 16 hours to be transcribed and is cotranscriptionally spliced

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

RNAs radiate from gene to cytoplasm as revealed by fluorescence in situ hybridization.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Physical Isolation of Nascent RNA Chains Transcribed by RNA Polymerase II: Evidence for Cotranscriptional Splicing

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

In vivo analysis of the stability and transport of nuclear poly(A)+ RNA.

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Nuclear export of different classes of RNA is mediated by specific factors

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Lateral mobility in membranes as detected by fluorescence recovery after photobleaching

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Discrete nuclear domains of poly(A) RNA and their relationship to the functional organization of the nucleus

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Export of mRNA from microinjected nuclei of Xenopus laevis oocytes

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

A three-dimensional view of precursor messenger RNA metabolism within the mammalian nucleus

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Advantages of 2'-O-methyl oligoribonucleotide probes for detecting RNA targets

6 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Evidence that all SC-35 domains contain mRNAs and that transcripts can be structurally constrained within these domains

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

REF1/Aly and the additional exon junction complex proteins are dispensable for nuclear mRNA export

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Intron status and 3'-end formation control cotranscriptional export of mRNA.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Induction of p21 mRNA synthesis after short-wavelength UV light visualized in individual cells by RNA FISH.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

The protein Mago provides a link between splicing and mRNA localization.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Accumulation of mature mRNA in the nuclear fraction of mammalian cells.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Inefficient processing impairs release of RNA from the site of transcription

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Dynamic relocation of transcription and splicing factors dependent upon transcriptional activity

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Splicing factors associate with nuclear HCMV-IE transcripts after transcriptional activation of the gene, but dissociate upon transcription inhibition: evidence for a dynamic organization of splicing factors.

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Localisation of splicing snRNPs in mammalian cells

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Ultrastructure of the nucleus in relation to transcription and splicing: roles of perichromatin fibrils and interchromatin granules

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Detection of specific messenger RNA by electron microscopic in situ hybridization: implications for nucleocytoplasmic transport

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

The intranuclear mobility of messenger RNA binding proteins is ATP dependent and temperature sensitive

27 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Spliced exons of adenovirus late RNAs colocalize with snRNP in a specific nuclear domain

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Demonstration of a dynamic, transcription-dependent organization of pre-mRNA splicing factors in polytene nuclei

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Differential interaction of splicing snRNPs with coiled bodies and interchromatin granules during mitosis and assembly of daughter cell nuclei

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

The inhibition of DRB (5,6-dichloro-1-β-d-ribofuranosylbenzimidazole) of hnRNA and mRNA production in HeLa cells

23 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Splicing of Balbiani ring 1 gene pre-mRNA occurs simultaneously with transcription.

23 June 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.200310139

Overexpression of TAP/p15 heterodimers bypasses nuclear retention and stimulates nuclear mRNA export

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.200310139

SR splicing factors serve as adapter proteins for TAP-dependent mRNA export

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.200310139

Electron tomography reveals posttranscriptional binding of pre-mRNPs to specific fibers in the nucleoplasm

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.200310139

Identity elements used in export of mRNAs

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.200310139

Disassembly of interchromatin granule clusters alters the coordination of transcription and pre-mRNA splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.200310139

An ATP-dependent step is required for the translocation of microinjected precursor mRNA into nuclear speckles

21 January 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2172041

Polyadenylic Acid Sequences: Role in Conversion of Nuclear RNA into Messenger RNA

31 August 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.200310139

Perichromatin fibrils are in situ forms of nascent transcripts

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.200310139

Characteristics of the polyadenylic acid segment associated with messenger ribonucleic acid in mouse sarcoma 180 ascites cells

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.200310139

Higher level organization of individual gene transcription and RNA splicing

21 January 2018

1 reference

https://api.crossref.org/works/10.1083%2FJCB.200310139

Localization of poly(A)-binding protein 2 (PABP2) in nuclear speckles is independent of import into the nucleus and requires binding to poly(A) RNA

21 January 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15117966

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

In vivo evidence that transcription and splicing are coordinated by a recruiting mechanism

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/15117966

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1083/JCB.200310139

1 reference

2 September 2017

1 reference

2 September 2017

PubMed publication ID

15117966

1 reference