A biotin interference assay highlights two different asymmetric interaction profiles for lambda integrase arm-type binding sites in integrative versus excisive recombination (Q38456971)

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scientific article published on 04 March 2008

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English	A biotin interference assay highlights two different asymmetric interaction profiles for lambda integrase arm-type binding sites in integrative versus excisive recombination	scientific article published on 04 March 2008

Statements

scholarly article

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

A biotin interference assay highlights two different asymmetric interaction profiles for lambda integrase arm-type binding sites in integrative versus excisive recombination (English)

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

author name string

Dane Hazelbaker

1

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

Marco A Azaro

2

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

Arthur Landy

3

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

language of work or name

0 references

publication date

4 March 2008

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

Journal of Biological Chemistry

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

283

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

18

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

12402-12414

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

Structure of the cooperative Xis-DNA complex reveals a micronucleoprotein filament that regulates phage lambda intasome assembly

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Fis Targets Assembly of the Xis Nucleoprotein Filament to Promote Excisive Recombination by Phage Lambda

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Architecture of the 99 bp DNA-six-protein regulatory complex of the lambda att site

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Mechanisms of site-specific recombination.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

DNA arms do the legwork to ensure the directionality of lambda site-specific recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Lambda integrase: armed for recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

A structural basis for allosteric control of DNA recombination by lambda integrase.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Architecture of recombination intermediates visualized by in-gel FRET of lambda integrase-Holliday junction-arm DNA complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Mutations in the amino-terminal domain of lambda-integrase have differential effects on integrative and excisive recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Peptide trapping of the Holliday junction intermediate in Cre-loxP site-specific recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Reversible inhibitors of lambda integrase-mediated recombination efficiently trap Holliday junction intermediates and form the basis of a novel assay for junction resolution

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

A conformational switch controls the DNA cleavage activity of lambda integrase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Integration host factor: putting a twist on protein-DNA recognition

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Arm sequences contribute to the architecture and catalytic function of a lambda integrase-Holliday junction complex.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Regulation of directionality in bacteriophage lambda site-specific recombination: structure of the Xis protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Differential affinity and cooperativity functions of the amino-terminal 70 residues of lambda integrase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Arm-site binding by lambda -integrase: solution structure and functional characterization of its amino-terminal domain

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

The small DNA binding domain of lambda integrase is a context-sensitive modulator of recombinase functions

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Distinct roles of RAG1 and RAG2 in binding the V(D)J recombination signal sequences

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Similarities and differences among 105 members of the Int family of site-specific recombinases

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

The catalytic domain of lambda site-specific recombinase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Variable structures of Fis-DNA complexes determined by flanking DNA-protein contacts

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Crystal structure of an IHF-DNA complex: a protein-induced DNA U-turn

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Spatial relationship between polymerase and exonuclease active sites of phage T4 DNA polymerase enzyme

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

57 Sequencing end-labeled DNA with base-specific chemical cleavages

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Bacteriophage lambda int protein recognizes two classes of sequence in the phage att site: characterization of arm-type sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Mutations in an integration host factor-binding site: effect on lambda site-specific recombination and regulatory implications

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Physical studies of protein-DNA complexes by footprinting

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Dynamic, structural, and regulatory aspects of lambda site-specific recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

A switch in the formation of alternative DNA loops modulates lambda site-specific recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Characterization of the bacteriophage lambda excisionase (Xis) protein: the C-terminus is required for Xis-integrase cooperativity but not for DNA binding

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

DNAase footprinting a simple method for the detection of protein-DNA binding specificity

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

6 September 2017

Empirical estimation of protein-induced DNA bending angles: applications to lambda site-specific recombination complexes

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

14 September 2017

A comparison of the effects of single-base and triple-base changes in the integrase arm-type binding sites on the site-specific recombination of bacteriophage lambda

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

14 September 2017

Viral integration and excision: structure of the lambda att sites

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

27 September 2017

Spermidine biases the resolution of Holliday junctions by phage lambda integrase

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

23 June 2018

Purification and properties of the Escherichia coli protein factor required for lambda integrative recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

23 June 2018

Determinants of directionality in lambda site-specific recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

23 June 2018

Resolution of synthetic att-site Holliday structures by the integrase protein of bacteriophage λ

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

23 June 2018

Purification of Bacteriophage λ, Int Protein

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

23 June 2018

The interaction of recombination proteins with supercoiled DNA: defining the role of supercoiling in lambda integrative recombination

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

23 June 2018

Cellular factors couple recombination with growth phase: characterization of a new component in the lambda site-specific recombination pathway.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

23 June 2018

Control of directionality in lambda site specific recombination

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

23 June 2018

Mapping of a higher order protein-DNA complex: two kinds of long-range interactions in lambda attL.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

23 June 2018

Three-dimensional structure of the E. coli DNA-binding protein FIS.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

23 June 2018

Lambda Int protein bridges between higher order complexes at two distant chromosomal loci attL and attR.

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2384228

23 June 2018

Structure and function of the phage lambda att site: size, int-binding sites, and location of the crossover point

1 reference

https://api.crossref.org/works/10.1074%2FJBC.M800544200

21 January 2018

Crystal structure of the excisionase-DNA complex from bacteriophage lambda

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https://api.crossref.org/works/10.1074%2FJBC.M800544200

21 January 2018

DNA binding and nucleotide flipping by the human DNA repair protein AGT.

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https://api.crossref.org/works/10.1074%2FJBC.M800544200

21 January 2018

Dissection of bacteriophage lambda site-specific recombination using synthetic peptide combinatorial libraries

1 reference

https://pubmed.ncbi.nlm.nih.gov/18319248

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Single base-pair precision and structural rigidity in a small IHF-induced DNA loop

1 reference

https://pubmed.ncbi.nlm.nih.gov/18319248

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Peptide inhibitors of DNA cleavage by tyrosine recombinases and topoisomerases

1 reference

https://pubmed.ncbi.nlm.nih.gov/18319248

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Purification of the bacteriophage lambda xis gene product required for lambda excisive recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/18319248

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mutational analysis of integrase arm-type binding sites of bacteriophage lambda. Integration and excision involve distinct interactions of integrase with arm-type sites

1 reference

https://pubmed.ncbi.nlm.nih.gov/18319248

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Directional control of site-specific recombination by bacteriophage lambda. Evidence that a binding site for Int protein far from the crossover point is required for integrative but not excisive recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/18319248

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Protein-protein interactions in a higher-order structure direct lambda site-specific recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/18319248

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Half-att site substrates reveal the homology independence and minimal protein requirements for productive synapsis in lambda excisive recombination

1 reference

https://pubmed.ncbi.nlm.nih.gov/18319248

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

10.1074/JBC.M800544200

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

PMC publication ID

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

PubMed publication ID

1 reference

Europe PubMed Central

PMC publication ID

3 September 2017

ResearchGate publication ID

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