Copy number variation and selection during reprogramming to pluripotency (Q39582693)

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scientific article published on March 2011

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English	Copy number variation and selection during reprogramming to pluripotency	scientific article published on March 2011

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instance of

scholarly article

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Europe PubMed Central

PubMed publication ID

21368824

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13 September 2017

title

Copy number variation and selection during reprogramming to pluripotency (English)

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PubMed publication ID

21368824

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13 September 2017

main subject

pluripotency

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author

Kari Alitalo

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17

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PubMed publication ID

21368824

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13 September 2017

Andras Nagy

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19

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21368824

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Elisa Närvä

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Elisa Närvä

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6

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Nizar N Batada

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Nizar N Batada

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2

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Ras Trokovic

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Ras Trokovic

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13

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Reija Autio

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Reija Autio

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5

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Riitta Lahesmaa

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18

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Riitta Lahesmaa

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21368824

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13 September 2017

Oliver Brüstle

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15

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Oliver Brüstle

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Milla Mikkola

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12

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Milla Mikkola

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21368824

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Karolina Lundin

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11

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Karolina Lundin

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Cia Olsson

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10

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Cia Olsson

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21368824

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David M Bazett-Jones

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16

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David P Bazett-Jones

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21368824

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13 September 2017

author name string

Samer M Hussein

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1

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21368824

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Sanna Vuoristo

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3

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21368824

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Reagan W Ching

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4

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Siemon Ng

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7

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Michel Sourour

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8

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Riikka Hämäläinen

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9

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Michael Peitz

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Timo Otonkoski

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20

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language of work or name

English

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publication date

1 March 2011

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21368824

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13 September 2017

published in

Nature

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21368824

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13 September 2017

volume

471

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21368824

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13 September 2017

issue

7336

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21368824

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13 September 2017

page(s)

58-62

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21368824

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13 September 2017

cites work

Suppression of induced pluripotent stem cell generation by the p53-p21 pathway

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RAS is regulated by the let-7 microRNA family

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Coordinate suppression of ERBB2 and ERBB3 by enforced expression of micro-RNA miR-125a or miR-125b

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DNA damage response as a candidate anti-cancer barrier in early human tumorigenesis

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Dynamic changes in the copy number of pluripotency and cell proliferation genes in human ESCs and iPSCs during reprogramming and time in culture

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piggyBac transposition reprograms fibroblasts to induced pluripotent stem cells

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reference URL

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Replication stress induces genome-wide copy number changes in human cells that resemble polymorphic and pathogenic variants

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Activation of the DNA damage checkpoint and genomic instability in human precancerous lesions

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Effect of telomere proximity on telomere position effect, chromosome healing, and sensitivity to DNA double-strand breaks in a human tumor cell line

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Replication stress induces tumor-like microdeletions in FHIT/FRA3B

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PubMed

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Virus-free induction of pluripotency and subsequent excision of reprogramming factors

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ATR Regulates Fragile Site Stability

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Mechanisms of change in gene copy number

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PubMed

reference URL

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Polycomb complexes repress developmental regulators in murine embryonic stem cells

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Live cell imaging distinguishes bona fide human iPS cells from partially reprogrammed cells

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Splinkerette PCR for more efficient characterization of gene trap events

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Array-based karyotyping for prognostic assessment in chronic lymphocytic leukemia: performance comparison of Affymetrix 10K2.0, 250K Nsp, and SNP6.0 arrays

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Highly efficient reprogramming to pluripotency and directed differentiation of human cells with synthetic modified mRNA.

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Induction of pluripotent stem cells from mouse embryonic and adult fibroblast cultures by defined factors

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

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Large-scale copy number polymorphism in the human genome

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Integrated detection and population-genetic analysis of SNPs and copy number variation

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PubMed

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12 December 2020

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High-resolution DNA analysis of human embryonic stem cell lines reveals culture-induced copy number changes and loss of heterozygosity

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PubMed

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Immortalization eliminates a roadblock during cellular reprogramming into iPS cells

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PubMed

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Activation of p53 by nutlin leads to rapid differentiation of human embryonic stem cells.

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PubMed

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Global variation in copy number in the human genome

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PubMed

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Origins and functional impact of copy number variation in the human genome

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PubMed

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A stable human-derived packaging cell line for production of high titer retrovirus/vesicular stomatitis virus G pseudotypes

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Increased sensitivity of subtelomeric regions to DNA double-strand breaks in a human cancer cell line

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequential DNA methylation of the Nanog and Oct-4 upstream regions in human NT2 cells during neuronal differentiation

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Detection of large-scale variation in the human genome

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mammalian telomeres resemble fragile sites and require TRF1 for efficient replication

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Opposing microRNA families regulate self-renewal in mouse embryonic stem cells

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The Ink4/Arf locus is a barrier for iPS cell reprogramming

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Distinct differentiation characteristics of individual human embryonic stem cell lines

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Phosphoproteomic analysis of human embryonic stem cells

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Pancreatic endoderm derived from human embryonic stem cells generates glucose-responsive insulin-secreting cells in vivo

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A complex role for FGF-2 in self-renewal, survival, and adhesion of human embryonic stem cells

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PubMed

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https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Human induced pluripotent stem cells free of vector and transgene sequences

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Linking the p53 tumour suppressor pathway to somatic cell reprogramming

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Vitamin C enhances the generation of mouse and human induced pluripotent stem cells

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Generation of human induced pluripotent stem cells by direct delivery of reprogramming proteins

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

A p53-mediated DNA damage response limits reprogramming to ensure iPS cell genomic integrity

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Induction of pluripotent stem cells from adult human fibroblasts by defined factors

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Common fragile sites as targets for chromosome rearrangements

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Human subtelomeres are hot spots of interchromosomal recombination and segmental duplication

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Human subtelomere structure and variation

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Adaptation to culture of human embryonic stem cells and oncogenesis in vivo

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

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12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Self-renewal of human embryonic stem cells requires insulin-like growth factor-1 receptor and ERBB2 receptor signaling

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identification and Classification of Chromosomal Aberrations in Human Induced Pluripotent Stem Cells

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/21368824

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Identifiers

DOI

10.1038/NATURE09871

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Europe PubMed Central

PubMed publication ID

21368824

retrieved

13 September 2017

Dimensions Publication ID

1046010238

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PubMed publication ID

21368824

1 reference

stated in

Europe PubMed Central

PubMed publication ID

21368824

retrieved

13 September 2017

ResearchGate publication ID

50267710

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