The phylogenetic distribution of bacterial ribonucleases. (Q39696551)

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12490701%20AND%20SRC:MED&resulttype=core&format=json

16 December 2019

title

The phylogenetic distribution of bacterial ribonucleases (English)

1 reference

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16 December 2019

1 reference

1

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16 December 2019

author name string

Harald Putzer

series ordinal

2

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16 December 2019

language of work or name

English

0 references

publication date

1 December 2002

1 reference

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16 December 2019

published in

Nucleic Acids Research

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16 December 2019

volume

30

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16 December 2019

issue

24

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16 December 2019

page(s)

5339-5346

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Bacillus subtilis YhaM, a member of a new family of 3'-to-5' exonucleases in gram-positive bacteria

16 December 2019

cites work

1 reference

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mRNA decay in Escherichia coli comes of age.

14 September 2017

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Assigning a function to a conserved group of proteins: the tRNA 3'-processing enzymes

14 September 2017

1 reference

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Archaeal RNase P has multiple protein subunits homologous to eukaryotic nuclear RNase P proteins

14 September 2017

1 reference

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Ribonuclease M5 has few, if any, mRNA substrates in Bacillus subtilis.

14 September 2017

1 reference

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RNase E plays an essential role in the maturation of Escherichia coli tRNA precursors

14 September 2017

1 reference

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Escherichia coli RNase M is a multiply altered form of RNase I

14 September 2017

1 reference

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Dicer functions in RNA interference and in synthesis of small RNA involved in developmental timing in C. elegans

14 September 2017

1 reference

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A natural classification of ribonucleases

14 September 2017

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The plant tRNA 3' processing enzyme has a broad substrate spectrum

14 September 2017

1 reference

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Identification of the gene encoding the 5S ribosomal RNA maturase in Bacillus subtilis: mature 5S rRNA is dispensable for ribosome function

14 September 2017

1 reference

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Exoribonuclease superfamilies: structural analysis and phylogenetic distribution

14 September 2017

1 reference

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Role for a bidentate ribonuclease in the initiation step of RNA interference

14 September 2017

1 reference

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Temperature sensitive mutants of Escherichia coli for tRNA synthesis

14 September 2017

1 reference

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RNase G (CafA protein) and RNase E are both required for the 5' maturation of 16S ribosomal RNA.

14 September 2017

1 reference

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Isolation of RNase H genes that are essential for growth of Bacillus subtilis 168

14 September 2017

1 reference

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Maturation of 23S ribosomal RNA requires the exoribonuclease RNase T

14 September 2017

1 reference

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Identification of the genes encoding Mn2+-dependent RNase HII and Mg2+-dependent RNase HIII from Bacillus subtilis: classification of RNases H into three families

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

The Ribonuclease P Database

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

The endoribonucleolytic N-terminal half of Escherichia coli RNase E is evolutionarily conserved in Synechocystis sp. and other bacteria but not the C-terminal half, which is sufficient for degradosome assembly

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Ribonuclease E organizes the protein interactions in the Escherichia coli RNA degradosome

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Toprim--a conserved catalytic domain in type IA and II topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

The CLUSTAL_X windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Proteins associated with RNase E in a multicomponent ribonucleolytic complex

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

A DEAD-box RNA helicase in the Escherichia coli RNA degradosome

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

The winds of (evolutionary) change: breathing new life into microbiology

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

There must be a prokaryote somewhere: microbiology's search for itself

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

The tRNA processing enzyme RNase T is essential for maturation of 5S RNA.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

RNase H confers specificity in the dnaA-dependent initiation of replication at the unique origin of the Escherichia coli chromosome in vivo and in vitro

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

The RNA moiety of ribonuclease P is the catalytic subunit of the enzyme

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Mutants of Escherichia coli thermosensitive for the synthesis of transfer RNA

14 September 2017

1 reference

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cmp, a cis-acting plasmid locus that increases interaction between replication origin and initiator protein

14 September 2017

1 reference

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The first step in the functional inactivation of the Escherichia coli polynucleotide phosphorylase messenger is a ribonuclease III processing at the 5' end.

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Transfer RNA is a substrate for RNase D in vivo

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Autoregulation of RNase III operon by mRNA processing

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

RNase T is responsible for the end-turnover of tRNA in Escherichia coli

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Ribonuclease H: from discovery to 3D structure

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Purification of potential 3′ processing nucleases using synthetic tRNA precursors

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Initiation of tRNA maturation by RNase E is essential for cell viability in E. coli

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

An lrp-like gene of Bacillus subtilis involved in branched-chain amino acid transport

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Structural characterization of a ribonuclease III processing signal

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Structural analysis and in vitro processing to p5 rRNA of a 9S RNA molecule isolated from an rne mutant of E. coli

14 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

The CafA protein required for the 5'-maturation of 16 S rRNA is a 5'-end-dependent ribonuclease that has context-dependent broad sequence specificity.

25 September 2017

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Translational control of mRNA processing in the F1845 fimbrial operon of Escherichia coli

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Site-specific ribonuclease activity of eukaryotic DNA topoisomerase I.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Expression and regulation of the rnc and pdxJ operons of Escherichia coli

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

30 S pre-ribosomal RNA of Escherichia coli and products of cleavage by ribonuclease III: Length and molecular weight

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Function of ribonuclease H in initiation of DNA replication in Escherichia coli K-12.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Cleavage by RNase III in the transcripts of the met Y-nus-A-infB operon of Escherichia coli releases the tRNA and initiates the decay of the downstream mRNA.

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Gene cloning and characterization of a novel extracellular ribonuclease of Bacillus subtilis

17 June 2018

1 reference

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Escherichia coli topoisomerase III-catalyzed cleavage of RNA

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

tRNA maturation in Aquifex aeolicus

17 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Purification and characterization of the Escherichia coli exoribonuclease RNase R. Comparison with RNase II.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Transcription of glycolytic genes and operons in Bacillus subtilis: evidence for the presence of multiple levels of control of the gapA operon

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Processing of the Bacillus subtilis thrS leader mRNA is RNase E-dependent in Escherichia coli.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Maturation pathways for E. coli tRNA precursors: a random multienzyme process in vivo.

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Mutational analysis of a ribonuclease III processing signal

20 August 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=140075

Endoribonuclease RNase III is essential in Bacillus subtilis

20 August 2018

1 reference

12 December 2020

Role of the protein moiety of ribonuclease P, a ribonucleoprotein enzyme

1 reference

12 December 2020

RNase III cleavages in non-coding leaders of Escherichia coli transcripts control mRNA stability and genetic expression

1 reference

12 December 2020

A novel secreted ribonuclease from Bacillus intermedius: gene structure and regulatory control

1 reference

12 December 2020

Endonuclease cleavage of messenger RNA in Bacillus subtilis

1 reference

12 December 2020

In vitro maturation of precursors of 5S ribosomal RNA from Bacillus subtilis

1 reference

12 December 2020

The ribonucleoprotein substrate for a ribosomal RNA-processing nuclease

1 reference

12 December 2020

Ribosomal RNA phylogeny and the primary lines of evolutionary descent

1 reference

12 December 2020

Identifiers

DOI

10.1093/NAR/GKF691

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12490701%20AND%20SRC:MED&resulttype=core&format=json

16 December 2019

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12490701%20AND%20SRC:MED&resulttype=core&format=json

16 December 2019

PubMed publication ID

12490701

1 reference

https://www.ebi.ac.uk/europepmc/webservices/rest/search?query=EXT_ID:12490701%20AND%20SRC:MED&resulttype=core&format=json