A 'one-pot' assay for the accessibility of DNA in a nucleosome core particle (Q39985143)

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English	A 'one-pot' assay for the accessibility of DNA in a nucleosome core particle	scientific article

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scholarly article

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Europe PubMed Central

PMC publication ID

516079

retrieved

16 September 2017

title

A 'one-pot' assay for the accessibility of DNA in a nucleosome core particle (English)

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stated in

Europe PubMed Central

PMC publication ID

516079

retrieved

16 September 2017

author name string

Chenyi Wu

series ordinal

1

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stated in

Europe PubMed Central

PMC publication ID

516079

retrieved

16 September 2017

Andrew Travers

series ordinal

2

1 reference

stated in

Europe PubMed Central

PMC publication ID

516079

retrieved

16 September 2017

publication date

25 August 2004

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stated in

Europe PubMed Central

PMC publication ID

516079

retrieved

16 September 2017

published in

Nucleic Acids Research

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stated in

Europe PubMed Central

PMC publication ID

516079

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16 September 2017

volume

32

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stated in

Europe PubMed Central

PMC publication ID

516079

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16 September 2017

issue

15

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stated in

Europe PubMed Central

PMC publication ID

516079

retrieved

16 September 2017

page(s)

e122

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stated in

Europe PubMed Central

PMC publication ID

516079

retrieved

16 September 2017

cites work

The histone octamer is invisible when NF-kappaB binds to the nucleosome

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516079

retrieved

22 September 2017

HMG-D and histone H1 alter the local accessibility of nucleosomal DNA.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516079

retrieved

22 September 2017

Molecular modeling of the chromatosome particle

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516079

retrieved

22 September 2017

Spontaneous access of proteins to buried nucleosomal DNA target sites occurs via a mechanism that is distinct from nucleosome translocation

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516079

retrieved

22 September 2017

Role of DNA sequence in nucleosome stability and dynamics

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516079

retrieved

22 September 2017

Position and orientation of the globular domain of linker histone H5 on the nucleosome.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516079

retrieved

22 September 2017

Linker histone protection of chromatosomes reconstituted on 5S rDNA from Xenopus borealis:a reinvestigation

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516079

retrieved

22 September 2017

Linker histone protects linker DNA on only one side of the core particle and in a sequence-dependent manner

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516079

retrieved

22 September 2017

The acidic tail of the high mobility group protein HMG-D modulates the structural selectivity of DNA binding

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516079

retrieved

22 September 2017

Sequence periodicities in chicken nucleosome core DNA.

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516079

retrieved

17 June 2018

Nucleosomal locations of dominant DNA sequence motifs for histone-DNA interactions and nucleosome positioning

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516079

retrieved

20 August 2018

Histone-DNA binding free energy cannot be measured in dilution-driven dissociation experiments

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516079

retrieved

20 August 2018

Energetics and affinity of the histone octamer for defined DNA sequences

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516079

retrieved

20 August 2018

HMG-D and Histone H1 Interplay during Chromatin Assembly and Early Embryogenesis

1 reference

stated in

PubMed Central

reference URL

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=516079

retrieved

2 December 2018

DNA distortion as a factor in nucleosome positioning

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15329384

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Restriction enzymes as probes of nucleosome stability and dynamics

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15329384

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Mechanism of protein access to specific DNA sequences in chromatin: a dynamic equilibrium model for gene regulation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15329384

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

The non-histone chromatin protein HMG1 protects linker DNA on the side opposite to that protected by linker histones

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15329384

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Sequence and position-dependence of the equilibrium accessibility of nucleosomal DNA target sites

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/15329384

retrieved

12 December 2020

based on heuristic

inferred from PubMed ID database lookup

Identifiers

DOI

10.1093/NAR/GNH121

1 reference

stated in

Europe PubMed Central

PMC publication ID

516079

retrieved

16 September 2017

PMC publication ID

516079

1 reference

stated in

Europe PubMed Central

PMC publication ID

516079

retrieved

16 September 2017

PubMed publication ID

15329384

1 reference

stated in

Europe PubMed Central

PMC publication ID

516079

retrieved

16 September 2017

ResearchGate publication ID

8383559

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