RNA-Seq reveals expression signatures of genes involved in oxygen transport, protein synthesis, folding, and degradation in response to heat stress in catfish (Q30620642)

From Wikidata

Jump to navigation Jump to search

scientific article

Language	Label	Description	Also known as
English	RNA-Seq reveals expression signatures of genes involved in oxygen transport, protein synthesis, folding, and degradation in response to heat stress in catfish	scientific article

Statements

scholarly article

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

RNA-Seq reveals expression signatures of genes involved in oxygen transport, protein synthesis, folding, and degradation in response to heat stress in catfish (English)

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

0 references

protein folding

0 references

1 reference

based on heuristic

inferred from title

1

object named as

Shikai Liu

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

11

object named as

Eric Peatman

0 references

Huseyin Kucuktas

13

object named as

Huseyin Kucuktas

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

Ludmilla Kaltenboeck

12

object named as

Ludmilla Kaltenboeck

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

8

object named as

Luyang Sun

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

9

object named as

Yu Zhang

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

author name string

Xiuli Wang

2

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

Fanyue Sun

3

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

Jiaren Zhang

4

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

Jianbin Feng

5

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

Hong Liu

6

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

K V Rajendran

7

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

Yanliang Jiang

10

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

Zhanjiang Liu

14

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

publication date

30 April 2013

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

Physiological Genomics

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

45

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

12

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

462-476

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

The effect of social stress on adrenal axis activity in horses: the importance of monitoring corticosteroid-binding globulin capacity

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Behavioral, metabolic, and molecular stress responses of marine bivalve Mytilus galloprovincialis during long-term acclimation at increasing ambient temperature

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Ontologizer 2.0--a multifunctional tool for GO term enrichment analysis and data exploration

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Relationship among circulating hemoglobin, nitric oxide synthase activities and angiogenic poise in red- and white-blooded Antarctic notothenioid fishes

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Thermal tolerance of Antarctic notothenioid fishes correlates with level of circulating hemoglobin

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Global fish production and climate change

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

The cellular response to heat stress in the goby Gillichthys mirabilis: a cDNA microarray and protein-level analysis.

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Proteasome inhibition leads to a heat-shock response, induction of endoplasmic reticulum chaperones, and thermotolerance

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Cloning, isolation, and characterization of mammalian legumain, an asparaginyl endopeptidase

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Blast2GO: a universal tool for annotation, visualization and analysis in functional genomics research

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Molecular and cellular mechanisms of iron homeostasis and toxicity in mammalian cells.

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Heat shock proteins: facts, thoughts, and dreams

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Osmotic stress-induced remodeling of the cortical cytoskeleton

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

The multifunctional fish gill: dominant site of gas exchange, osmoregulation, acid-base regulation, and excretion of nitrogenous waste

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Chaperone-mediated protein folding

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Peptidylproline cis/trans isomerases

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Rhythms of gene expression in a fluctuating intertidal environment

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Improved detection of overrepresentation of Gene-Ontology annotations with parent child analysis

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Roles of molecular chaperones in protein degradation

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Thermal adaptation in biological membranes: is homeoviscous adaptation the explanation?

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Hepatic corticosteroid-binding globulin (CBG) messenger RNA expression and plasma CBG concentrations in young pigs in response to heat and social stress

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

The rapidly expanding CREC protein family: members, localization, function, and role in disease.

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

CD-HIT Suite: a web server for clustering and comparing biological sequences

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Evolution of thermal sensitivity of ectotherm performance

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

KEGG: kyoto encyclopedia of genes and genomes

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Stress signaling from the lumen of the endoplasmic reticulum: coordination of gene transcriptional and translational controls

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Evolution of the cellular stress proteome: from monophyletic origin to ubiquitous function

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Molecular and evolutionary basis of the cellular stress response

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

The wheat peptidyl prolyl cis-trans-isomerase FKBP77 is heat induced and developmentally regulated

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

RNA-seq analysis of mucosal immune responses reveals signatures of intestinal barrier disruption and pathogen entry following Edwardsiella ictaluri infection in channel catfish, Ictalurus punctatus

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

The heat-shock response

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Molecular characterization and gene expression of the channel catfish ferritin H subunit after bacterial infection and iron treatment.

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Efficient assembly and annotation of the transcriptome of catfish by RNA-Seq analysis of a doubled haploid homozygote

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Effects of thermal acclimation on transcriptional responses to acute heat stress in the eurythermal fish Gillichthys mirabilis (Cooper).

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Transcriptional responses to thermal acclimation in the eurythermal fish Gillichthys mirabilis (Cooper 1864).

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Identification and characterization of a heat shock protein 70 family member in channel catfish (Ictalurus punctatus).

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Collective roles of molecular chaperones in protein degradation pathways associated with neurodegenerative diseases

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Next-generation transcriptome assembly

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Both G3BP1 and G3BP2 contribute to stress granule formation

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Glyceraldehyde 3-phosphate dehydrogenase-S, a sperm-specific glycolytic enzyme, is required for sperm motility and male fertility

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Heat shock proteins and heat adaptation of the whole organism

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Isolation and analysis of differentially expressed genes in Penicillium glabrum subjected to thermal stress

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

A comprehensive comparison of RNA-Seq-based transcriptome analysis from reads to differential gene expression and cross-comparison with microarrays: a case study in Saccharomyces cerevisiae

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Structure, function, and regulation of the mammalian facilitative glucose transporter gene family

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

From RNA-seq reads to differential expression results

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Activation of the ATPase activity of hsp90 by the stress-regulated cochaperone aha1

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Temperature and salmonid reproduction: implications for aquaculture

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

The function of heat-shock proteins in stress tolerance: degradation and reactivation of damaged proteins

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Relative expression software tool (REST©) for group-wise comparison and statistical analysis of relative expression results in real-time PCR

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Climate change and temperature-dependent biogeography: oxygen limitation of thermal tolerance in animals

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Ecology. Physiology and climate change

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Hyperoxia alleviates thermal stress in the Antarctic bivalve, Laternula elliptica: evidence for oxygen limited thermal tolerance

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Identification of genes associated with heat tolerance in Arctic charr exposed to acute thermal stress

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Ribosomal genes and heat shock proteins as putative markers for chronic, sublethal heat stress in Arctic charr: applications for aquaculture and wild fish

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Physiological, behavioral and biochemical adaptations of intertidal fishes to hypoxia

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

De novo assembly and analysis of RNA-seq data.

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

ABySS: a parallel assembler for short read sequence data

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Stability of reference genes for real-time PCR analyses in channel catfish (Ictalurus punctatus) tissues under varying physiological conditions

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Thermal physiology and vertical zonation of intertidal animals: optima, limits, and costs of living

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Temperature induced anaerobiosis in two populations of the polychaete worm Arenicola marina (L.)

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Transcriptomic signatures of attachment, NF-κB suppression and IFN stimulation in the catfish gill following columnaris bacterial infection

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Optimization of de novo transcriptome assembly from next-generation sequencing data

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Transcriptional response to heat stress in the Antarctic bivalve Laternula elliptica

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Heat shock proteins and thermoresistance in lizards

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Cloning and characterization of a putative human serine/threonine protein kinase transcriptionally modified during anisotonic and isotonic alterations of cell volume

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Protein disulfide isomerase

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Velvet: algorithms for de novo short read assembly using de Bruijn graphs

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Identification and characterization of hypoxia-induced genes in Carassius auratus blastulae embryonic cells using suppression subtractive hybridization

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Role of blood-oxygen transport in thermal tolerance of the cuttlefish, Sepia officinalis

1 reference

https://api.crossref.org/works/10.1152%2FPHYSIOLGENOMICS.00026.2013

21 January 2018

Identifiers

10.1152/PHYSIOLGENOMICS.00026.2013

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

PubMed publication ID

1 reference

Europe PubMed Central

PubMed publication ID

25 June 2017

ResearchGate publication ID

0 references

Sitelinks

Wikipedia(0 entries)

Wikibooks(0 entries)

Wikinews(0 entries)

Wikiquote(0 entries)

Wikisource(0 entries)

Wikiversity(0 entries)

Wikivoyage(0 entries)

Wiktionary(0 entries)

Multilingual sites(0 entries)

Retrieved from "https://www.wikidata.org/w/index.php?title=Q30620642&oldid=1964245743"