Estimating the annotation error rate of curated GO database sequence annotations (Q33285442)

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English	Estimating the annotation error rate of curated GO database sequence annotations	scientific article

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scholarly article

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Europe PubMed Central

PubMed publication ID

17519041

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25 July 2017

title

Estimating the annotation error rate of curated GO database sequence annotations (English)

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Europe PubMed Central

PubMed publication ID

17519041

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25 July 2017

main subject

database

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author

Alfred L. Brown

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Alfred L Brown

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2

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author name string

Craig E Jones

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1

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Europe PubMed Central

PubMed publication ID

17519041

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25 July 2017

Ute Baumann

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3

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Europe PubMed Central

PubMed publication ID

17519041

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25 July 2017

publication date

22 May 2007

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Europe PubMed Central

PubMed publication ID

17519041

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25 July 2017

published in

BMC Bioinformatics

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Europe PubMed Central

PubMed publication ID

17519041

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25 July 2017

volume

8

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Europe PubMed Central

PubMed publication ID

17519041

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25 July 2017

page(s)

170

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Europe PubMed Central

PubMed publication ID

17519041

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25 July 2017

copyright license

Creative Commons Attribution 2.0 Generic

start time

22 May 2007

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April 2022 Public Data File from Crossref

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copyrighted

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April 2022 Public Data File from Crossref

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SQL

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Europe PubMed Central

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26 June 2022

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https://europepmc.org/article/PMC/PMC1892569

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21 June 2018

Automated methods of predicting the function of biological sequences using GO and BLAST.

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Genome annotation errors in pathway databases due to semantic ambiguity in partial EC numbers

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21 June 2018

An evaluation of GO annotation retrieval for BioCreAtIvE and GOA.

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21 June 2018

The Universal Protein Resource (UniProt)

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GOtcha: a new method for prediction of protein function assessed by the annotation of seven genomes

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The Gene Ontology Annotation (GOA) Database: sharing knowledge in Uniprot with Gene Ontology

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GoFigure: automated Gene Ontology annotation

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Protein family classification and functional annotation

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Large-scale protein annotation through gene ontology

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21 June 2018

Intrinsic errors in genome annotation

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21 June 2018

Sources of systematic error in functional annotation of genomes: domain rearrangement, non-orthologous gene displacement and operon disruption.

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Gapped BLAST and PSI-BLAST: a new generation of protein database search programs

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Mining sequence annotation databanks for association patterns.

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31 October 2018

How incorrect annotations evolve--the case of short ORFs

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31 October 2018

Modeling the percolation of annotation errors in a database of protein sequences

1 reference

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PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17519041

retrieved

12 December 2020

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inferred from PubMed ID database lookup

Errors in genome annotation

1 reference

stated in

PubMed

reference URL

https://pubmed.ncbi.nlm.nih.gov/17519041

retrieved

12 December 2020

based on heuristic

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Identifiers

DOI

10.1186/1471-2105-8-170

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stated in

Europe PubMed Central

PubMed publication ID

17519041

retrieved

25 July 2017

DBLP publication ID

journals/bmcbi/JonesBB07

1 reference

stated in

DBLP Dataset 2021-01-02

retrieved

28 January 2021

Dimensions Publication ID

1018777295

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PMC publication ID

1892569

1 reference

stated in

Europe PubMed Central

PubMed publication ID

17519041

retrieved

25 July 2017

PubMed publication ID

17519041

1 reference

stated in

Europe PubMed Central

PubMed publication ID

17519041

retrieved

25 July 2017

ResearchGate publication ID

6313752

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