Identifying modifications in RNA by MALDI mass spectrometry (Q33292929)

25 July 2017

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title

Identifying modifications in RNA by MALDI mass spectrometry (English)

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matrix-assisted laser desorption/ionization

25 July 2017

main subject

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1

Stephen Douthwaite

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25 July 2017

Finn Kirpekar

2

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25 July 2017

language of work or name

English

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publication date

1 January 2007

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25 July 2017

published in

Methods in Enzymology

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25 July 2017

volume

425

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25 July 2017

page(s)

3-20

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Characterization of the 23 S ribosomal RNA m5U1939 methyltransferase from Escherichia coli

25 July 2017

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A novel partial modification at C2501 in Escherichia coli 23S ribosomal RNA

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Enhanced detection of oligonucleotides in UV MALDI MS using the tetraamine spermine as a matrix additive

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How antibiotic-producing organisms avoid suicide

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rRNA modifications and ribosome function

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Small non-coding RNAs in Archaea

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Presence and location of modified nucleotides in Escherichia coli tmRNA: structural mimicry with tRNA acceptor branches

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Reconstitution of functional 50S ribosomes from in vitro transcripts of Bacillus stearothermophilus 23S rRNA.

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A second function for pseudouridine synthases: A point mutant of RluD unable to form pseudouridines 1911, 1915, and 1917 in Escherichia coli 23S ribosomal RNA restores normal growth to an RluD-minus strain

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Influence of phylogeny on posttranscriptional modification of rRNA in thermophilic prokaryotes: the complete modification map of 16S rRNA of Thermus thermophilus

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Recognition of nucleotide G745 in 23 S ribosomal RNA by the rrmA methyltransferase

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The macrolide-ketolide antibiotic binding site is formed by structures in domains II and V of 23S ribosomal RNA.

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Capreomycin binds across the ribosomal subunit interface using tlyA-encoded 2'-O-methylations in 16S and 23S rRNAs

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7 January 2021

Mapping posttranscriptional modifications in 5S ribosomal RNA by MALDI mass spectrometry

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7 January 2021

The archaeon Haloarcula marismortui has few modifications in the central parts of its 23S ribosomal RNA.

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7 January 2021

RNA fragmentation studied in a matrix-assisted laser desorption/ionisation tandem quadrupole/orthogonal time-of-flight mass spectrometer

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Posttranscriptional modification of the central loop of domain V in Escherichia coli 23 S ribosomal RNA.

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7 January 2021

Methyltransferase That Modifies Guanine 966 of the 16 S rRNA: FUNCTIONAL IDENTIFICATION AND TERTIARY STRUCTURE

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7 January 2021

Classical and novel approaches to the detection and localization of the numerous modified nucleotides in eukaryotic ribosomal RNA

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7 January 2021

Methyltransferase Erm(37) slips on rRNA to confer atypical resistance in Mycobacterium tuberculosis

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7 January 2021

Identifying the methyltransferases for m(5)U747 and m(5)U1939 in 23S rRNA using MALDI mass spectrometry

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Modifications in Thermus thermophilus 23 S ribosomal RNA are centered in regions of RNA-RNA contact.

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7 January 2021

Ion stability of nucleic acids in infrared matrix-assisted laser desorption/ionization mass spectrometry

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Loss of a conserved 7-methylguanosine modification in 16S rRNA confers low-level streptomycin resistance in bacteria

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7 January 2021

The RNA Modification Database: 1999 update

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Structure of functionally activated small ribosomal subunit at 3.3 angstroms resolution

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7 January 2021

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7 January 2021

Structure of the 70S ribosome complexed with mRNA and tRNA

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7 January 2021

Structural analysis of RNA using chemical and enzymatic probing monitored by primer extension

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7 January 2021

The avilamycin resistance determinants AviRa and AviRb methylate 23S rRNA at the guanosine 2535 base and the uridine 2479 ribose

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7 January 2021

Time-of-flight mass spectrometry of underivatized single-stranded DNA oligomers by matrix-assisted laser desorption

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7 January 2021

Microbial identification by mass cataloging

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7 January 2021

10.1016/S0076-6879(07)25001-3

Identifiers

DOI

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release_tj4sq65iknd5pj5ft52vvl5vfa

25 July 2017

Fatcat ID

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Fatcat

https://api.fatcat.wiki/v0/release/tj4sq65iknd5pj5ft52vvl5vfa

24 November 2022

mapped directly with Wikidata item

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