Multiple expressed MHC class II loci in salmonids; details of one non-classical region in Atlantic salmon (Salmo salar) (Q33331060)

25 July 2017

title

Multiple expressed MHC class II loci in salmonids; details of one non-classical region in Atlantic salmon (Salmo salar) (English)

1 reference

25 July 2017

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Unni Grimholt

4

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author name string

Håvard Harstad

series ordinal

1

1 reference

25 July 2017

Morten F Lukacs

series ordinal

2

1 reference

25 July 2017

Hege G Bakke

series ordinal

3

1 reference

25 July 2017

language of work or name

English

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publication date

28 April 2008

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25 July 2017

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25 July 2017

volume

9

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25 July 2017

page(s)

193

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Genomic organization of duplicated major histocompatibility complex class I regions in Atlantic salmon (Salmo salar).

25 July 2017

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21 June 2018

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21 June 2018

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Patterns of variability at the major histocompatibility class II alpha locus in Atlantic salmon contrast with those at the class I locus.

21 June 2018

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Interchromosomal duplication of major histocompatibility complex class I regions in rainbow trout (Oncorhynchus mykiss), a species with a presumably recent tetraploid ancestry.

21 June 2018

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Genome duplication in the teleost fish Tetraodon nigroviridis reveals the early vertebrate proto-karyotype

21 June 2018

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Recent duplication and inter-locus gene conversion in major histocompatibility class II genes in a teleost, the three-spined stickleback.

21 June 2018

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21 June 2018

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21 June 2018

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Development and application of a salmonid EST database and cDNA microarray: data mining and interspecific hybridization characteristics

21 June 2018

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The major histocompatibility class I locus in Atlantic salmon (Salmo salar L.): polymorphism, linkage analysis and protein modelling.

21 June 2018

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Evidence that the separation of Mhc class II from class I loci in the zebrafish, Danio rerio, occurred by translocation

21 June 2018

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Whole-Genome Shotgun Assembly and Analysis of the Genome of Fugu rubripes

21 June 2018

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Nucleotide sequence of the MHC class I genomic region of a teleost, the medaka (Oryzias latipes)

21 June 2018

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Analysis of Relative Gene Expression Data Using Real-Time Quantitative PCR and the 2−ΔΔCT Method

21 June 2018

1 reference

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TIP41 interacts with TAP42 and negatively regulates the TOR signaling pathway

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

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21 June 2018

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Comparative genomics of the MHC: glimpses into the evolution of the adaptive immune system

21 June 2018

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21 June 2018

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Characterization of the MHC class I region of the Japanese pufferfish (Fugu rubripes).

21 June 2018

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Primitive synteny of vertebrate major histocompatibility complex class I and class II genes

21 June 2018

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The impact of the non-classical MHC proteins HLA-DM and HLA-DO on loading of MHC class II molecules

21 June 2018

2 references

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

21 June 2018

https://pubmed.ncbi.nlm.nih.gov/18439319

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

The Staden package, 1998

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

The chromosomal duplication model of the major histocompatibility complex

21 June 2018

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21 June 2018

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Identification and mapping of two divergent, unlinked major histocompatibility complex class II B genes in Xiphophorus fishes

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

A role for HLA-DO as a co-chaperone of HLA-DM in peptide loading of MHC class II molecules.

21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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21 June 2018

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Structure, organization, and chromosomal mapping of the human neurogranin gene (NRGN)

21 June 2018

1 reference

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How HLA-DM edits the MHC class II peptide repertoire: survival of the fittest?

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

Kinetic analysis of peptide loading onto HLA-DR molecules mediated by HLA-DM.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

Paralogy mapping: identification of a region in the human MHC triplicated onto human chromosomes 1 and 9 allows the prediction and isolation of novel PBX and NOTCH loci

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

A dot-matrix program with dynamic threshold control suited for genomic DNA and protein sequence analysis

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

Organization of Mhc class II B genes in the zebrafish (Brachydanio rerio).

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

Class II genes of the human major histocompatibility complex. The DO beta gene is a divergent member of the class II beta gene family

21 June 2018

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21 June 2018

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A rapid alkaline extraction procedure for screening recombinant plasmid DNA

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

A third broad lineage of major histocompatibility complex (MHC) class I in teleost fish; MHC class II linkage and processed genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

Identification of a novel tubulin-destabilizing protein related to the chaperone cofactor E.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

Physical and genetic mapping of the rainbow trout major histocompatibility regions: evidence for duplication of the class I region

31 October 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

Unique haplotypes of co-segregating major histocompatibility class II A and class II B alleles in Atlantic salmon (Salmo salar) give rise to diverse class II genotypes.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

Classical MHC class I genes composed of highly divergent sequence lineages share a single locus in rainbow trout (Oncorhynchus mykiss).

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

Modes of salmonid MHC class I and II evolution differ from the primate paradigm

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

The major histocompatibility class II alpha chain in salmonid fishes

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

A contig map of the Mhc class I genomic region in the zebrafish reveals ancient synteny

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

Nonlinkage of major histocompatibility complex class I and class II loci in bony fishes

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

Charactreization of polymorphism within the H-2M MHC class II loci

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2386828

Liver of juvenile Atlantic salmon, Salmo salar L.: a light, transmission, and scanning electron microscopic study, with special reference to the sinusoid

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/18439319

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2164-9-193

1 reference

Dimensions Publication ID

25 July 2017

1 reference

https://scigraph.springernature.com/pub.10.1186/1471-2164-9-193

9 September 2019

1 reference

25 July 2017

1 reference