A robust method for estimating gene expression states using Affymetrix microarray probe level data (Q33551524)

28 July 2017

title

A robust method for estimating gene expression states using Affymetrix microarray probe level data (English)

1 reference

28 July 2017

Megu Ohtaki

1

1 reference

28 July 2017

Keiko Otani

2

1 reference

28 July 2017

Keiko Hiyama

3

1 reference

28 July 2017

Naomi Kamei

4

1 reference

28 July 2017

Kenichi Satoh

5

1 reference

28 July 2017

Eiso Hiyama

6

1 reference

28 July 2017

publication date

12 April 2010

1 reference

28 July 2017

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28 July 2017

volume

11

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28 July 2017

page(s)

183

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Creative Commons Attribution 2.0 Generic

28 July 2017

copyright license

start time

12 April 2010

1 reference

April 2022 Public Data File from Crossref

copyright status

copyrighted

1 reference

April 2022 Public Data File from Crossref

describes a project that uses

affy

object named as

affy

1 reference

CZ Software Mentions: A large dataset of software mentions in the biomedical literature

cites work

A gene expression bar code for microarray data

1 reference

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Filtering genes to improve sensitivity in oligonucleotide microarray data analysis.

21 June 2018

1 reference

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Identification of candidate genes involved in neuroblastoma progression by combining genomic and expression microarrays with survival data.

21 June 2018

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Gene expression profile in beta-amyloid-treated SH-SY5Y neuroblastoma cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2873532

The MicroArray Quality Control (MAQC) project shows inter- and intraplatform reproducibility of gene expression measurements

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2873532

Structural, functional and therapeutic biology of survivin

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2873532

Prediction of individual response to platinum/paclitaxel combination using novel marker genes in ovarian cancers

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2873532

How to decide? Different methods of calculating gene expression from short oligonucleotide array data will give different results

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2873532

The MYCN enigma: significance of MYCN expression in neuroblastoma

21 June 2018

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https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2873532

Effects of filtering by Present call on analysis of microarray experiments

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2873532

Differentially expressed genes throughout the cellular immortalization processes are quite different between normal human fibroblasts and endothelial cells.

21 June 2018

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Sequence dependence of cross-hybridization on short oligo microarrays

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2873532

Exploration, normalization, and summaries of high density oligonucleotide array probe level data

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2873532

Genome-wide analysis of gene expression associated with MYCN in human neuroblastoma.

21 June 2018

1 reference

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Comprehensive sampling of gene expression in human cell lines with massively parallel signature sequencing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2873532

Summaries of Affymetrix GeneChip probe level data

21 June 2018

1 reference

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Large-scale analysis of the human and mouse transcriptomes

21 June 2018

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Model-based analysis of oligonucleotide arrays: model validation, design issues and standard error application

21 June 2018

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Significance analysis of microarrays applied to the ionizing radiation response

21 June 2018

1 reference

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Model-based analysis of oligonucleotide arrays: expression index computation and outlier detection

21 June 2018

1 reference

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Effectiveness of screening for neuroblastoma at 6 months of age: a retrospective population-based cohort study

21 June 2018

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Selection of a novel drug-response predictor in esophageal cancer: a novel screening method using microarray and identification of IFITM1 as a potent marker gene of CDDP response

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2873532

Robust estimators for expression analysis

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2873532

Association of multiple copies of the N-myc oncogene with rapid progression of neuroblastomas

31 October 2018

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20380745

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Treatment results of advanced neuroblastoma with the first Japanese study group protocol. Study Group of Japan for Treatment of Advanced Neuroblastoma

1 reference

PubMed

https://pubmed.ncbi.nlm.nih.gov/20380745

inferred from PubMed ID database lookup

12 December 2020

based on heuristic

Identifiers

DOI

10.1186/1471-2105-11-183

1 reference

journals/bmcbi/OhtakiOHKSH10

28 July 2017

DBLP publication ID

1 reference

DBLP Dataset 2021-01-02

Dimensions Publication ID

28 January 2021

0 references

1 reference

28 July 2017

1 reference