Massive expansions of Dscam splicing diversity via staggered homologous recombination during arthropod evolution (Q33572975)

28 July 2017

title

Massive expansions of Dscam splicing diversity via staggered homologous recombination during arthropod evolution (English)

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28 July 2017

2

Namshin Kim

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28 July 2017

Brenton R Graveley

4

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author name string

Christopher Lee

series ordinal

1

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28 July 2017

Meenakshi Roy

series ordinal

3

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28 July 2017

language of work or name

English

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publication date

24 November 2009

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28 July 2017

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28 July 2017

volume

16

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28 July 2017

issue

1

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28 July 2017

page(s)

91-105

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A regulator of Dscam mutually exclusive splicing fidelity.

28 July 2017

cites work

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Deep surveying of alternative splicing complexity in the human transcriptome by high-throughput sequencing

21 June 2018

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Alternative isoform regulation in human tissue transcriptomes

21 June 2018

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A Double S Shape Provides the Structural Basis for the Extraordinary Binding Specificity of Dscam Isoforms

21 June 2018

1 reference

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The Dscam homologue of the crustacean Daphnia is diversified by alternative splicing like in insects

21 June 2018

1 reference

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Complex alternative splicing

21 June 2018

1 reference

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A vast repertoire of Dscam binding specificities arises from modular interactions of variable Ig domains.

21 June 2018

1 reference

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Dscam diversity is essential for neuronal wiring and self-recognition

21 June 2018

1 reference

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Structural basis of Dscam isoform specificity

21 June 2018

1 reference

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Three-Dimensional Phylogeny Explorer: distinguishing paralogs, lateral transfer, and violation of "molecular clock" assumption with 3D visualization

21 June 2018

1 reference

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Drosophila sensory neurons require Dscam for dendritic self-avoidance and proper dendritic field organization

21 June 2018

1 reference

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Global analysis of exon creation versus loss and the role of alternative splicing in 17 vertebrate genomes

21 June 2018

1 reference

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Got diversity? Wiring the fly brain with Dscam

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

AgDscam, a hypervariable immunoglobulin domain-containing receptor of the Anopheles gambiae innate immune system

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

The molecular diversity of Dscam is functionally required for neuronal wiring specificity in Drosophila

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Tracking the evolution of alternatively spliced exons within the Dscam family

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

The iStem, a long-range RNA secondary structure element required for efficient exon inclusion in the Drosophila Dscam pre-mRNA.

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Mutually exclusive splicing of the insect Dscam pre-mRNA directed by competing intronic RNA secondary structures

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Extensive diversity of Ig-superfamily proteins in the immune system of insects

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

The organization and evolution of the dipteran and hymenopteran Down syndrome cell adhesion molecule (Dscam) genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Minimal conditions for exonization of intronic sequences: 5' splice site formation in alu exons

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Stochastic yet biased expression of multiple Dscam splice variants by individual cells

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

RevTrans: Multiple alignment of coding DNA from aligned amino acid sequences.

21 June 2018

1 reference

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The birth of an alternatively spliced exon: 3' splice-site selection in Alu exons

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Common exon duplication in animals and its role in alternative splicing

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Drosophila Dscam is required for divergent segregation of sister branches and suppresses ectopic bifurcation of axons

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Genome-wide detection of alternative splicing in expressed sequences of human genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Gene structure prediction and alternative splicing analysis using genomically aligned ESTs

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Alternative splicing: increasing diversity in the proteomic world

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Protein diversity from alternative splicing: a challenge for bioinformatics and post-genome biology

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Drosophila Dscam is an axon guidance receptor exhibiting extraordinary molecular diversity

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

EMBOSS: the European Molecular Biology Open Software Suite

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Frequent alternative splicing of human genes

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

CLUSTAL W: improving the sensitivity of progressive multiple sequence alignment through sequence weighting, position-specific gap penalties and weight matrix choice

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

The neighbor-joining method: a new method for reconstructing phylogenetic trees

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Dendrite self-avoidance is controlled by Dscam

21 June 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Homophilic Dscam interactions control complex dendrite morphogenesis

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Alternative adaptive immunity in invertebrates.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Variable window binding for mutually exclusive alternative splicing

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Analysis of Dscam diversity in regulating axon guidance in Drosophila mushroom bodies

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Transmembrane/juxtamembrane domain-dependent Dscam distribution and function during mushroom body neuronal morphogenesis

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Axonal targeting of olfactory receptor neurons in Drosophila is controlled by Dscam

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

Origin of alternative splicing by tandem exon duplication

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

EST comparison indicates 38% of human mRNAs contain possible alternative splice forms.

31 October 2018

1 reference

https://eutils.ncbi.nlm.nih.gov/entrez/eutils/elink.fcgi?dbfrom=pmc&linkname=pmc_refs_pubmed&retmode=json&id=2802040

31 October 2018

Identifiers

DOI

10.1261/RNA.1812710

1 reference

28 July 2017

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28 July 2017

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